1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtatgaacttacatttccatcacaagaactcgtggtggttctcgtaagagtgacaactgcatgttgcggtattagaagaatgaaaagtgcaggtgctgaaactttagagtgataagatgtttaatggcaatcgtggtctgtgcagGTCTGTAGGATTGGCGACGTGTGCTGGTTGCCATCGCACCCTTGGATTCGGTAGGTTTTTGACGTGCCTCAACCAGAATTGGCACCCAGCTTGCTTTTGC
species | Physcomitrella patens |
transcript | PP1S231_3V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GCTCCTGGTGTTGCGCCTGCCCCGAATCCAATGGCGGCTCGGGCAACTGG GTCTGTAGGATTGGCGACGTGTGCTGGTTGCCATCGCACCCTTGGATTCGG
genomic: GCTCCTGGTGTTGCGCCTGCCCCGAATCCAATGGCGGCTCGGGCAACTGGgtatgaactt ... gtctgtgcagGTCTGTAGGATTGGCGACGTGTGCTGGTTGCCATCGCACCCTTGGATTCGG
aggtgctgaaactttagagtgataagatgtttaatggcaatcgtggtctgtgcagGTCTGTAGGATTGGCGACGTGTGCTGGTTGCCATCGCACCCTTGGATTCGGTAGGTTTTTGACGTGCCTCAACCAGAATTGGCACCCAGCTTGCTTTTGC
gtttaat putative branch site (score: 5)
ataagatgtttaat TA-rich tract