1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtaagttcaatttccacatgagattgattgttggaaggtagaacaaatgctggacctaggacatggatgagtattgtatgcactcagtggccggactggaggtgttgttgactatgctgggaaacattcattcatagtttattactttatttcctttggattgttccttaactctggctggttggtttcagTACGAGTGCTGCATTACTCTCCAAAGAGGACAATGGTTGATATAGCCGAGGTCTTTTTGTGGTTGATGGCTTTGGGTACTATTTTGAGTGCCTCATTCTG
species | Physcomitrella patens |
transcript | PP1S1_478V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AAAGGCTGCTGGAGAGCATCTGGAGGAAGCTTTAGATTCTAACAACGAAG TACGAGTGCTGCATTACTCTCCAAAGAGGACAATGGTTGATATAGCCGAGGEST: gi|100436803|gb|BY979533.1|BY979533
genomic: AAAGGCTGCTGGAGAGCATCTGGAGGAAGCTTTAGATTCTAACAACGAAGgtaagttcaa ... ttggtttcagTACGAGTGCTGCATTACTCTCCAAAGAGGACAATGGTTGATATAGCCGAGG
EST: AAGGCTGCTGGAGAGCATCTGGAGGAAGCTTTAGATTTCTAACA-CGAAG TACGAGTGCTGCATTACTCTCCAAAGAGGACCATGGTTGATATAGCCCGAG
genomic: AAGGCTGCTGGAGAGCATCTGGAGGAAGCTTTAGATT-CTAACAACGAAGgtaagttcaa ... ttggtttcagTACGAGTGCTGCATTACTCTCCAAAGAGGACAATGGTTGATATAGCC-GAG
gtttattactttatttcctttggattgttccttaactctggctggttggtttcagTACGAGTGCTGCATTACTCTCCAAAGAGGACAATGGTTGATATAGCCGAGGTCTTTTTGTGGTTGATGGCTTTGGGTACTATTTTGAGTGCCTCATTCTG
ccttaac putative branch site (score: 4)
ttactttattt TA-rich tract