1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgagaacttaagtgcttatggacgagtttcaagacatttgcacttcattctcgcggtcaaatgaggttgcaaaggtcttgtttctatcatttatttacttaagtactgtgcttttgttcggcaccaagttcgtggcatgtaggaattcttaattctggtctccattgtgtctttggattgacagATGAGAAGATTGCTTTGTTGGGTGCCATCCAGTCCCTGTTTGAAGGATCCATGTATACGTTTGTATTCCTTTGGACACCAGCCTTGAGCCCTAACGATCA
species | Physcomitrella patens |
transcript | PP1S18_8V6.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CAAGAGCTTCACCCATCAATTTACGCAGGCAGCTTCAGCTATTGCTTCTG ATGAGAAGATTGCTTTGTTGGGTGCCATCCAGTCCCTGTTTGAAGGATCCA
genomic: CAAGAGCTTCACCCATCAATTTACGCAGGCAGCTTCAGCTATTGCTTCTGgtgagaactt ... ggattgacagATGAGAAGATTGCTTTGTTGGGTGCCATCCAGTCCCTGTTTGAAGGATCCA
tcgtggcatgtaggaattcttaattctggtctccattgtgtctttggattgacagATGAGAAGATTGCTTTGTTGGGTGCCATCCAGTCCCTGTTTGAAGGATCCATGTATACGTTTGTATTCCTTTGGACACCAGCCTTGAGCCCTAACGATCA
tcttaat putative branch site (score: 9)
aattcttaatt TA-rich tract