1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtgagagttacaaacatatccggtcaagacttccgtggtttgccggtttgacatgttgctgcttcacacgataagtttctcacaatcacaccatgcttaagtgttaaatttcttatctgtttgtctaaaactggaattcaattttgttggatggtgggcttggcagGTTCTAAGTATGAGTCGACTAGGAGGTGCTGGTGCACTTGTTAACAGTGATCCGCCCGCTGAG
species | Physcomitrella patens |
transcript | PP1S173_83V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TGCTGGATGAAATCATCGATTACGTCNAGTTCCTGCAACTCCAANTAAAG GTTCTAAGTATGA
genomic: TGCTGGATGAAATCATCGATTACGTCAAGTTCCTGCAACTCCAAGTAAAGgtgagagtta ... ggcttggcagGTTCTAAGTATGA
cttatctgtttgtctaaaactggaattcaattttgttggatggtgggcttggcagGTTCTAAGTATGAGTCGACTAGGAGGTGCTGGTGCACTTGTTAACAGTGATCCGCCCGCTGAG
gtctaaa putative branch site (score: 7)
aattcaattttgtt TA-rich tract