Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacgcataactgctataatccctttcttgaatgagttcattactcttattaacttgttttcactagtatgaacgaccatgattgatggatgttagttattttcaacctgtttctgtcgttgattaggcttaggtgagtaatttttttcattttcttcattaatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAGAAGCAGCTTATCCAGTTGCGCCTCAAGGCCACCAAGCGTGTGGAGGAGC

Basic information

species Physcomitrella patens
transcript PP1S165_40V6.1
intron # 4
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15327215|gb|BI487759.1|BI487759
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67722360|gb|BJ972619.1|BJ972619
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GATTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|15727833|gb|BI740486.1|BI740486
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|19790799|gb|BQ042060.1|BQ042060
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67723699|gb|BJ973958.1|BJ973958
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67722122|gb|BJ972381.1|BJ972381
EST:     TGGGACGCNTGTCAGAGGAGGTCGGATGGCATCGTTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67727402|gb|BJ977661.1|BJ977661
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCTTTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|208366378|gb|DC947574.1|DC947574
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|19781399|gb|BQ039697.1|BQ039697
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|208390391|gb|DC933436.1|DC933436
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|6102452|gb|AW126922.1|AW126922
EST:     TGGGACGCTTGCCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162179780|gb|FC356371.1|FC356371
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|19777477|gb|BQ039187.1|BQ039187
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGC
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGC
EST: gi|162265812|gb|FC442399.1|FC442399
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAATTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|37847889|gb|BJ605897.1|BJ605897
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|18338756|gb|BJ170780.1|BJ170780
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|208389209|gb|DC933237.1|DC933237
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162248471|gb|FC419787.1|FC419787
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|37850125|gb|BJ608133.1|BJ608133
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162226438|gb|FC402418.1|FC402418
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162265322|gb|FC440440.1|FC440440
EST:     GTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: GTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|7287198|gb|AW599685.1|AW599685
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67724485|gb|BJ974744.1|BJ974744
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|18337171|gb|BJ169195.1|BJ169195
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|19790615|gb|BQ041965.1|BQ041965
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|18351942|gb|BJ183994.1|BJ183994
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAG
EST: gi|162249768|gb|FC427571.1|FC427571
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67719085|gb|BJ969344.1|BJ969344
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCTTTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|15729016|gb|BI741094.1|BI741094
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162249038|gb|FC421485.1|FC421485
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162243069|gb|FC417917.1|FC417917
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67717215|gb|BJ967474.1|BJ967474
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGA
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGA
EST: gi|162248472|gb|FC419788.1|FC419788
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|37846595|gb|BJ604603.1|BJ604603
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67572309|gb|BJ945133.1|BJ945133
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|19788908|gb|BQ040993.1|BQ040993
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|100383589|gb|BY950373.1|BY950373
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|208350725|gb|DC918185.1|DC918185
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67719783|gb|BJ970042.1|BJ970042
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTCTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162226439|gb|FC402419.1|FC402419
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|100445000|gb|BY982828.1|BY982828
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67703612|gb|BJ963845.1|BJ963845
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCGTTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|7583679|gb|AW699586.1|AW699586
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162220761|gb|FC395530.1|FC395530
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67712774|gb|BJ966223.1|BJ966223
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|19790666|gb|BQ041991.1|BQ041991
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67709727|gb|BJ965543.1|BJ965543
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGA
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGA
EST: gi|162263817|gb|FC438631.1|FC438631
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|7147790|gb|AW509712.1|AW509712
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|6102471|gb|AW126941.1|AW126941
EST:     TGGGACGCTAGTCACAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67723870|gb|BJ974129.1|BJ974129
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162243068|gb|FC417916.1|FC417916
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162254030|gb|FC429346.1|FC429346
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67709794|gb|BJ965610.1|BJ965610
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAG
EST: gi|18339393|gb|BJ171420.1|BJ171420
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|6102345|gb|AW126815.1|AW126815
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCA-G                         GAAGTTGNAGGAGAAGAGGAAAGCCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGA-GTTGGAGGAGAAGAGGAAAGCCAAG
EST: gi|162230765|gb|FC406396.1|FC406396
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|100416078|gb|BY957065.1|BY957065
EST:     GGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACNACCATCA-G                         GAGTTGGAGGAGAAGAGGAAAGC-AAGTCTAAAGTGTTTTACGAGCGCAA
genomic: GGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGAC-ACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAA
EST: gi|37825214|gb|BJ583280.1|BJ583280
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAATCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|7047175|gb|AW477069.1|AW477069
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|208386852|gb|DC953505.1|DC953505
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162238616|gb|FC418173.1|FC418173
EST:     CGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: CGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|37830769|gb|BJ588781.1|BJ588781
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|208375440|gb|DC940494.1|DC940494
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67720891|gb|BJ971150.1|BJ971150
EST:     TGGGACGCNTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|18368837|gb|BJ200922.1|BJ200922
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGA
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGA
EST: gi|37824408|gb|BJ582474.1|BJ582474
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|22491916|gb|BU051839.1|BU051839
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|18337371|gb|BJ169395.1|BJ169395
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162254031|gb|FC429347.1|FC429347
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67723804|gb|BJ974063.1|BJ974063
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67726948|gb|BJ977207.1|BJ977207
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|208392486|gb|DC904290.1|DC904290
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162260041|gb|FC435760.1|FC435760
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67725732|gb|BJ975991.1|BJ975991
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162265813|gb|FC442400.1|FC442400
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAATTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162180944|gb|FC358598.1|FC358598
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67695678|gb|BJ955911.1|BJ955911
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|100388424|gb|BY952026.1|BY952026
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|6167076|gb|AW145279.1|AW145279
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAGGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|37833564|gb|BJ591576.1|BJ591576
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162249767|gb|FC427570.1|FC427570
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTTTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|37846844|gb|BJ604852.1|BJ604852
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|208352325|gb|DC901984.1|DC901984
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|19789334|gb|BQ041246.1|BQ041246
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67718502|gb|BJ968761.1|BJ968761
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|19790850|gb|BQ042088.1|BQ042088
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAAGAA-GCCAAGTCTAAAGTGTTTTA
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTA
EST: gi|67709623|gb|BJ965439.1|BJ965439
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGA
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGA
EST: gi|162196728|gb|FC374667.1|FC374667
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|37840421|gb|BJ598429.1|BJ598429
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67728047|gb|BJ978306.1|BJ978306
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTCTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|18346103|gb|BJ178146.1|BJ178146
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAATCTAAAGTGTTTTACGAGCGCAA
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAA
EST: gi|37824975|gb|BJ583041.1|BJ583041
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67723681|gb|BJ973940.1|BJ973940
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67726026|gb|BJ976285.1|BJ976285
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162196727|gb|FC374666.1|FC374666
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|6227531|gb|AW156130.1|AW156130
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|37822489|gb|BJ580555.1|BJ580555
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162268483|gb|FC444356.1|FC444356
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|37847928|gb|BJ605936.1|BJ605936
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162200685|gb|FC378388.1|FC378388
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|100446358|gb|CJ970657.1|CJ970657
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAGGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162237121|gb|FC413280.1|FC413280
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162278187|gb|FC454422.1|FC454422
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|22492516|gb|BU052439.1|BU052439
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162278188|gb|FC454423.1|FC454423
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|37850299|gb|BJ608307.1|BJ608307
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|208373395|gb|DC941034.1|DC941034
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|37844389|gb|BJ602397.1|BJ602397
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|208351635|gb|DC910037.1|DC910037
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162179781|gb|FC356372.1|FC356372
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|67709605|gb|BJ965421.1|BJ965421
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162250761|gb|FC426610.1|FC426610
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|7286860|gb|AW599347.1|AW599347
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|208382836|gb|DC923883.1|DC923883
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|162234910|gb|FC409331.1|FC409331
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
EST: gi|15261857|gb|BI437167.1|BI437167
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCTTTTT
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGC-GCAA
EST: gi|162263818|gb|FC438632.1|FC438632
EST:     TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAG                         GAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG
genomic: TGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 201

GGTGTTGAGGCTGCAGCCTGGCCACAAATTCTGTTTGTTGGGACGCTTGTCAGAGGAGGTCGGATGGCATCATTACGACACCATCAAGgtacgcataa ... taatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAGAAGCAGCTTATCCAGTTGCGCCTCAAGGCCACCAAGCGTGTGGAGGAGC




<











<


<











 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtcgttgattaggcttaggtgagtaatttttttcattttcttcattaatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAGAAGCAGCTTATCCAGTTGCGCCTCAAGGCCACCAAGCGTGTGGAGGAGC
                                          cattaat  putative branch site (score: 201)
                          tttttttcattttctt  CT-rich tract
                     agtaatttttttcatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtacgcataactgctataatccctttcttgaatgagttcattactcttattaacttgttttcactagtatgaacgaccatgattgatggatgttagttattttcaacctgtttctgtcgttgattaggcttaggtgagtaatttttttcattttcttcattaatttgcagGAGTTGGAGGAGAAGAGGAAAGCCAAGTCTAAAGTGTTTTACGAGCGCAAGAAGCAGCTTATCCAGTTGCGCCTCAAGGCCACCAAGCGTGTGGAGGAGC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGGAG