1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgcgtgaaatttcaaccttggtagtctgcgcaagtttctgtctggtagttagcctagtacattgtttgtcgcctctttgctgtgctttggctaatttggaggatgtgcattgtatgagcagGTACGGATACGCAACGGCTTCAGCTTTACACGGGATTAGACATATGTTGGTGAAAGATTTCATGCTACAG
species | Physcomitrella patens |
transcript | PP1S145_88V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: ATGAAAGATGACCCAGAAACTGACAAAGCATTTGGTTGGGTTCTGGAAAT GTATGGATACGCAACGGCTTCAGCTTTACACGGGATTAGACATATGTTGGTEST: gi|37829180|gb|BJ587192.1|BJ587192
genomic: ATGAAAGATGACCCAGAAACTGACAAAGCATTTGGTTGGGTTCTGGAAATgtgcgtgaaa ... gtatgagcagGTACGGATACGCAACGGCTTCAGCTTTACACGGGATTAGACATATGTTGGT
EST: ATGAAAGATGACCCAGAAACTGACAAAGCATTTGGTTGGGTTCTGGAAAT GTACGGATACGCAACGGCTTCAGCTTTACACGGGATTAGACATATGTTGGTEST: gi|208388859|gb|DC945435.1|DC945435
genomic: ATGAAAGATGACCCAGAAACTGACAAAGCATTTGGTTGGGTTCTGGAAATgtgcgtgaaa ... gtatgagcagGTACGGATACGCAACGGCTTCAGCTTTACACGGGATTAGACATATGTTGGT
EST: ATGAAAGATGACCCAGAAACTGACNAAGCATTNGGTNGGGTTCTGGAAAT GTACGGATACGCAACGGCTTCAGCTTTACACGGGATTAGACATATGTTGGT
genomic: ATGAAAGATGACCCAGAAACTGACAAAGCATTTGGTTGGGTTCTGGAAATgtgcgtgaaa ... gtatgagcagGTACGGATACGCAACGGCTTCAGCTTTACACGGGATTAGACATATGTTGGT
tgtcgcctctttgctgtgctttggctaatttggaggatgtgcattgtatgagcagGTACGGATACGCAACGGCTTCAGCTTTACACGGGATTAGACATATGTTGGTGAAAGATTTCATGCTACAG
ggctaat putative branch site (score: 5)
taattt TA-rich tract