1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtacttagcgtgctacttcttcgacctatgcccagcaactatagtagccttttggacacggttatagctttctacctttccgatcctagatcgaggggtaacatcaagagtaatgagaactgatgtatgcctcaactcattgtgagcagGTGAAATTGATTGATTTCTCTCCAGGAGAAAAATTCATGGTAACATACAGCAGTCATGAACCCAGCAACCCAAGGGACACTCAG
species | Physcomitrella patens |
transcript | PP1S138_36V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GGGGTGGCGAGAAGTCCTTCAATCGTCTCATGCGTTACATCCATCCCCAG GTGAAATTGATTGATTTCTCTCCAGGAGAAAAATTCATGGTAACATACAGCEST: gi|162213005|gb|FC389221.1|FC389221
genomic: GGGGTGGCGAGAAGTCCTTCAATCGTCTCATGCGTTACATCCATCCCCAGgtacttagcg ... ttgtgagcagGTGAAATTGATTGATTTCTCTCCAGGAGAAAAATTCATGGTAACATACAGC
EST: GGGGTGGCGAGAAGTCCTTCAATCGTCTCATGCGTTACATCCATCCCCAG GTGAAATTGATTGATTTCTCTCCAGGAGAAAAATTCATGGTAACATACAGCEST: gi|162170163|gb|FC347283.1|FC347283
genomic: GGGGTGGCGAGAAGTCCTTCAATCGTCTCATGCGTTACATCCATCCCCAGgtacttagcg ... ttgtgagcagGTGAAATTGATTGATTTCTCTCCAGGAGAAAAATTCATGGTAACATACAGC
EST: GGGGTGGCGAGAAGTCCTTCAATCGTCTCATGCGTTACATCCATCCCCAG GTGAAATTGATTGATTTCTCTCCAGGAGAAAAATTCATGGTAACATACAGCEST: gi|162186685|gb|FC363657.1|FC363657
genomic: GGGGTGGCGAGAAGTCCTTCAATCGTCTCATGCGTTACATCCATCCCCAGgtacttagcg ... ttgtgagcagGTGAAATTGATTGATTTCTCTCCAGGAGAAAAATTCATGGTAACATACAGC
EST: GAAGTCCTTCAATCGTCTCATGCGTTACATCCATCCCCAG GTGAAATTGATTGATTTCTCTCCAGGAGAAAAATTCATGGTAACATACAGCEST: gi|162154476|gb|FC330478.1|FC330478
genomic: GAAGTCCTTCAATCGTCTCATGCGTTACATCCATCCCCAGgtacttagcg ... ttgtgagcagGTGAAATTGATTGATTTCTCTCCAGGAGAAAAATTCATGGTAACATACAGC
EST: GGGGTGGCGAGAAGTCCTTCAATCGTCTCATGCGTTACATCCATCCCCAG GTGAAATTGATTGATTTCTCTCCAGGAGAAAAATTCATGGTAACATACAGCEST: gi|162262409|gb|FC439673.1|FC439673
genomic: GGGGTGGCGAGAAGTCCTTCAATCGTCTCATGCGTTACATCCATCCCCAGgtacttagcg ... ttgtgagcagGTGAAATTGATTGATTTCTCTCCAGGAGAAAAATTCATGGTAACATACAGC
EST: GGGGTGGCGAGAAGTCCTTCAATCGTCTCATGCGTTACATCCATCCCCAG GTGAAATTGATTGATTTCTCTCCAGGAGAAAAATTCATGGTAACATACAGCEST: gi|162171931|gb|FC349029.1|FC349029
genomic: GGGGTGGCGAGAAGTCCTTCAATCGTCTCATGCGTTACATCCATCCCCAGgtacttagcg ... ttgtgagcagGTGAAATTGATTGATTTCTCTCCAGGAGAAAAATTCATGGTAACATACAGC
EST: GGGGTGGCGAGAAGTCCTTCAATCGTCTCATGCGTTACATCCATCCCCAG GTGAAATTGATTGATTTCTCTCCAGGAGAAAAATTCATGGTAACATACAGCEST: gi|162230691|gb|FC406114.1|FC406114
genomic: GGGGTGGCGAGAAGTCCTTCAATCGTCTCATGCGTTACATCCATCCCCAGgtacttagcg ... ttgtgagcagGTGAAATTGATTGATTTCTCTCCAGGAGAAAAATTCATGGTAACATACAGC
EST: GGGGTGGCGAGAAGTCCTTCAATCGTCTCATGCGTTACATCCATCCCCAG GTGAAATTGATTGATTTCTCTCCAGGAGAAAAATTCATGGTAACATACAGC
genomic: GGGGTGGCGAGAAGTCCTTCAATCGTCTCATGCGTTACATCCATCCCCAGgtacttagcg ... ttgtgagcagGTGAAATTGATTGATTTCTCTCCAGGAGAAAAATTCATGGTAACATACAGC
ggggtaacatcaagagtaatgagaactgatgtatgcctcaactcattgtgagcagGTGAAATTGATTGATTTCTCTCCAGGAGAAAAATTCATGGTAACATACAGCAGTCATGAACCCAGCAACCCAAGGGACACTCAG
aactgat putative branch site (score: 14)