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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagcatcagacctaaacggttgatcataaatggaaatgtttaagctcgataggcgttaacatatcaccgtcttttgatccaatctacatacggattgtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAACGCCGGAGGATGGGTTTATCCTCGTCTTGGATTTGGGCTTTACAATGAGG

Basic information

species Physcomitrella patens
transcript PP1S132_188V6.1
intron # 4
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18343010|gb|BJ175047.1|BJ175047
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67712629|gb|BJ966078.1|BJ966078
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|208370733|gb|DC936855.1|DC936855
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100360796|gb|BY965905.1|BY965905
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67717962|gb|BJ968221.1|BJ968221
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18351326|gb|BJ183378.1|BJ183378
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100385050|gb|BY987513.1|BY987513
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67717967|gb|BJ968226.1|BJ968226
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCGTCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67703907|gb|BJ964140.1|BJ964140
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100379904|gb|BY968748.1|BY968748
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67716888|gb|BJ967147.1|BJ967147
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100413644|gb|BY974919.1|BY974919
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100384596|gb|BY987455.1|BY987455
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|22132786|gb|BQ827356.1|BQ827356
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|162279682|gb|FC455395.1|FC455395
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18356800|gb|BJ188859.1|BJ188859
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18359979|gb|BJ192040.1|BJ192040
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|162277016|gb|FC453738.1|FC453738
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|208356762|gb|DC906424.1|DC906424
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACNAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100437436|gb|BY961517.1|BY961517
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|162204806|gb|FC381163.1|FC381163
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCAACAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67704497|gb|BJ964730.1|BJ964730
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100361569|gb|BY984072.1|BY984072
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67716733|gb|BJ966993.1|BJ966993
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18353588|gb|BJ185643.1|BJ185643
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGC
EST: gi|7207588|gb|AW561635.1|AW561635
EST:     TGGCTAACAAGAAGGACGTACGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67718587|gb|BJ968846.1|BJ968846
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|162165860|gb|FC340937.1|FC340937
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCAACAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100406936|gb|BY973941.1|BY973941
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67709865|gb|BJ965681.1|BJ965681
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18349260|gb|BJ181309.1|BJ181309
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100367392|gb|BY984682.1|BY984682
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67716614|gb|BJ966874.1|BJ966874
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67703236|gb|BJ963469.1|BJ963469
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100413055|gb|BY992566.1|BY992566
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100444828|gb|BY982656.1|BY982656
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|208383642|gb|DC907033.1|DC907033
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67702771|gb|BJ963004.1|BJ963004
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|208375564|gb|DC940534.1|DC940534
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100413378|gb|BY956642.1|BY956642
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100398059|gb|BY954067.1|BY954067
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18352124|gb|BJ184178.1|BJ184178
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|19789510|gb|BQ041350.1|BQ041350
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18349445|gb|BJ181494.1|BJ181494
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18343055|gb|BJ175093.1|BJ175093
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|162238600|gb|FC418976.1|FC418976
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCAACAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67704581|gb|BJ964814.1|BJ964814
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67716486|gb|BJ966746.1|BJ966746
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCNAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67717644|gb|BJ967903.1|BJ967903
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100400141|gb|BY990799.1|BY990799
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67703888|gb|BJ964121.1|BJ964121
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTC
EST: gi|67720048|gb|BJ970307.1|BJ970307
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100371930|gb|BY967621.1|BY967621
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18347287|gb|BJ179333.1|BJ179333
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCA
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCA
EST: gi|22132787|gb|BQ827357.1|BQ827357
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67719655|gb|BJ969914.1|BJ969914
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGAACGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100391356|gb|BY971616.1|BY971616
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100415346|gb|BY975270.1|BY975270
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18330593|gb|BJ162599.1|BJ162599
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18355681|gb|BJ187740.1|BJ187740
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100403710|gb|BY955063.1|BY955063
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTGCGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67717956|gb|BJ968215.1|BJ968215
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18374487|gb|BJ206065.1|BJ206065
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100450939|gb|CJ974516.1|CJ974516
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67717836|gb|BJ968095.1|BJ968095
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|208379757|gb|DC907642.1|DC907642
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18370351|gb|BJ201953.1|BJ201953
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67709707|gb|BJ965523.1|BJ965523
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100417354|gb|BY957290.1|BY957290
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|162216578|gb|FC392475.1|FC392475
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCAACAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67702372|gb|BJ962605.1|BJ962605
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100409362|gb|BY991974.1|BY991974
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18347424|gb|BJ179470.1|BJ179470
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18342989|gb|BJ175025.1|BJ175025
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100408074|gb|BY955896.1|BY955896
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100352342|gb|BY983160.1|BY983160
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|162279004|gb|FC454743.1|FC454743
EST:     AGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: AGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|208347093|gb|DC909363.1|DC909363
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67704208|gb|BJ964441.1|BJ964441
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67712544|gb|BJ965993.1|BJ965993
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18345275|gb|BJ177317.1|BJ177317
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100376429|gb|BY986162.1|BY986162
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67704428|gb|BJ964661.1|BJ964661
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67709856|gb|BJ965672.1|BJ965672
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67701819|gb|BJ962052.1|BJ962052
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|162220345|gb|FC395726.1|FC395726
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCAACAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18371674|gb|BJ203276.1|BJ203276
EST:     GGCTAACAAGAAGGACGTAAGCCTTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: GGCTAACAAGAAGGACGTAGGCCTT-GTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|208368165|gb|DC931419.1|DC931419
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18355292|gb|BJ187351.1|BJ187351
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67573963|gb|BJ946787.1|BJ946787
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18364748|gb|BJ196821.1|BJ196821
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|100410406|gb|BY992090.1|BY992090
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67719374|gb|BJ969633.1|BJ969633
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|208362196|gb|DC939620.1|DC939620
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|67718568|gb|BJ968827.1|BJ968827
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
EST: gi|18354948|gb|BJ187007.1|BJ187007
EST:     TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAANAG                         GCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC
genomic: TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAAC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 34 (downstream exon)
Score: 30

TGGCTAACAAGAAGGACGTAGGCCTTGTCGGTTCATCAGCCTACGAAAAGgtaagcatca ... gtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAACGCCGGAGGATGGGTTTATCCTCGTCTTGGATTTGGGCTTTACAATGAGG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ggcgttaacatatcaccgtcttttgatccaatctacatacggattgtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAACGCCGGAGGATGGGTTTATCCTCGTCTTGGATTTGGGCTTTACAATGAGG
     taacatat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaagcatcagacctaaacggttgatcataaatggaaatgtttaagctcgataggcgttaacatatcaccgtcttttgatccaatctacatacggattgtgacaatagGCCCTTGTCGAGCAATGGATCGACTTCGCCACCATGGAGATTGACGTCAACGCCGGAGGATGGGTTTATCCTCGTCTTGGATTTGGGCTTTACAATGAGG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG