1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaagaatctgtgtttccaccaaagttttggttttctgcgatggctctaaatattgaagcattttctcacgaccatttgcagtctcctgtggttcaaattttgaaagtatgtattttgaagcatttaggtgacctggtaactgtttcagGTATGTCGTGGATGCAGCAGACAAAGACAATATTGCCATTTCTAAGAATGAACTGCACGACTTGTTGAACAAGCCTTCACTTTATGGGACCCCCTTGCTT
species | Physcomitrella patens |
transcript | PP1S103_13V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GATTTCCGGAGCATGTGGGAGCGTTATTGTCGTGGTGTGTCTGCAATTGT GTATGTCGTGGATGCAGCAGACAAAGACAATATTGCCATTTCTAAGAATGA
genomic: GA-TTCCGGAGCATGTGGGAGCGTTATTGTCGTGGTGTGTCTGCAATTGTgtaagaatct ... actgtttcagGTATGTCGTGGATGCAGCAGACAAAGACAATATTGCCATTTCTAAGAATGA
caaattttgaaagtatgtattttgaagcatttaggtgacctggtaactgtttcagGTATGTCGTGGATGCAGCAGACAAAGACAATATTGCCATTTCTAAGAATGAACTGCACGACTTGTTGAACAAGCCTTCACTTTATGGGACCCCCTTGCTT
tggtaac putative branch site (score: 8)
ctgtttc CT-rich tract
aaagtatgtatttt TA-rich tract