1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...caatatccatgttcgaaaatcatggtttgagtcctacagttgtgagtatgttggtggtgttgggttaatgacacgtttagagtttgctggtggaattcagCTGGACAACGGAGTGGAGGTGGCATTTACTGACAAACTTCGCTTTGGCCGCGTACGCCTCCTTGATAAT
species | Physcomitrella patens |
transcript | PP1S101_82V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GCGACGAAGAAGAAGCGTTTCCGACAACTCACTCGAAAGTACTTTTGCAG CTGGACAACGGAGTGGAGGTGGCATTTACTGACAAACTTCGCTTTGGCCGCEST: gi|162219002|gb|FC394909.1|FC394909
genomic: GCGACGAAGAAGAAGCGTTTCCGACAACTCACTCGAAAGTACTTTTGCAGgtgtgcattc ... tggaattcagCTGGACAACGGAGTGGAGGTGGCATTTACTGACAAACTTCGCTTTGGCCGC
EST: GCGACGAAGAAGAAGCGTTTCCGACAACTCACTCGAAAGTACTTTTGCAG CTGGACAACGGAGTGGAGGTGGCATTTACTGACAAACTTCGCTTTGGCCGC
genomic: GCGACGAAGAAGAAGCGTTTCCGACAACTCACTCGAAAGTACTTTTGCAGgtgtgcattc ... tggaattcagCTGGACAACGGAGTGGAGGTGGCATTTACTGACAAACTTCGCTTTGGCCGC
gtatgttggtggtgttgggttaatgacacgtttagagtttgctggtggaattcagCTGGACAACGGAGTGGAGGTGGCATTTACTGACAAACTTCGCTTTGGCCGCGTACGCCTCCTTGATAAT
ggttaat putative branch site (score: 10)
ttaatga TA-rich tract