Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tgcagttttgtttataaattattactcgtactactgaaaacatttcaaatgtcttaacgaagtaggggggaccatccaattttgttggggtgagatacagGAACGCAGGGGCTTGAGGATTGGAAAAAAGCTCCCAACTCCCCAACCAAAGCTCTAAAGTGGTATCGAATTCATG

Basic information

species Physcomitrella patens
transcript PP1S100_63V6.2
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

caaatgtcttaacgaagtaggggggaccatccaattttgttggggtgagatacagGAACGCAGGGGCTTGAGGATTGGAAAAAAGCTCCCAACTCCCCAACCAAAGCTCTAAAGTGGTATCGAATTCATG
      tcttaac  putative branch site (score: 2)
                                aattttgtt  TA-rich tract