1 5' 3' | 2 5' 3' | 3 5' 3' |
...ttgaaaatttgttccaattcgtttttgtactattcgaagattttgtaaatttctgtattcctggttcttgacaaagtctatgttggttttccatgtgcagACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAACATTTCTGTACTTGAACAGCACCTTGTAGTGATTGAAACCTCTATCCTCT
species | Physcomitrella patens |
transcript | PP1S9_355V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGG ACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAACEST: gi|162238831|gb|FC415060.1|FC415060
genomic: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGGgtcagttatt ... ccatgtgcagACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAAC
EST: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGG ACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAACEST: gi|162248564|gb|FC425340.1|FC425340
genomic: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGGgtcagttatt ... ccatgtgcagACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAAC
EST: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGG ACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAACEST: gi|7584193|gb|AW700091.1|AW700091
genomic: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGGgtcagttatt ... ccatgtgcagACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAAC
EST: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGG ACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAACEST: gi|162242345|gb|FC416114.1|FC416114
genomic: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGGgtcagttatt ... ccatgtgcagACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAAC
EST: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGG ACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAACEST: gi|6102550|gb|AW127020.1|AW127020
genomic: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGGgtcagttatt ... ccatgtgcagACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAAC
EST: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGG ACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAACEST: gi|162248563|gb|FC425339.1|FC425339
genomic: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGGgtcagttatt ... ccatgtgcagACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAAC
EST: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGG ACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAACEST: gi|162250415|gb|FC426277.1|FC426277
genomic: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGGgtcagttatt ... ccatgtgcagACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAAC
EST: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGG ACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAACEST: gi|162234155|gb|FC410759.1|FC410759
genomic: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGGgtcagttatt ... ccatgtgcagACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAAC
EST: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGG ACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAACEST: gi|162242359|gb|FC416115.1|FC416115
genomic: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGGgtcagttatt ... ccatgtgcagACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAAC
EST: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGG ACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAAC
genomic: GTTCGGAAGGCCCGCAAGGAGGAATTGAAGAAGACAAATGCAGCATTCGGgtcagttatt ... ccatgtgcagACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAAC
taaatttctgtattcctggttcttgacaaagtctatgttggttttccatgtgcagACAAGCGCTTCCCATTGGTATCGCTGTTGGTATCCTTGGGATTGTAGGAACATTTCTGTACTTGAACAGCACCTTGTAGTGATTGAAACCTCTATCCTCT
tcttgac putative branch site (score: 4)
ttttccat putative PPT