1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...tgaatttgacgcatgttctgcctatggatcctttttcttacatctatttaatgatttggtttggcaccacttaatgttcgtatttatgtttgcaatgcagATGTCATCTCCATTGCCAAGACCAACGAGAATTTTCGTCTATTGTACGACAACAAGGGTCGTTTCACCCTTCATCACATCAGTGCTGAGGAAGCTAAG
species | Physcomitrella patens |
transcript | PP1S81_172V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AGGTTTCATGG ATGTCATCTCCATTGCCAAGACCAACGAGAATTTTTCGTCTATTGTACGAC
genomic: AGGTTTCATGGgtacgttatc ... tgcaatgcagATGTCATCTCCATTGCCAAGACCAACGAGAA-TTTTCGTCTATTGTACGAC
atttaatgatttggtttggcaccacttaatgttcgtatttatgtttgcaatgcagATGTCATCTCCATTGCCAAGACCAACGAGAATTTTCGTCTATTGTACGACAACAAGGGTCGTTTCACCCTTCATCACATCAGTGCTGAGGAAGCTAAG
acttaat putative branch site (score: 4)
tatttatgttt TA-rich tract