1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaagacgctctctgagtgtgttagattatacatgcacttcagactgaattgacacattacggttttagacgattgagacaataatgtttatgaattatttgagagcactctcattttcctattttcggcttgtcaggattaggtctaatctatgtcttgggcttcctgcagGTGGGGGAGAGTGATGAAAAGCTGGCGGACCGTATTAAGCTGTATGCTGTAGCGACAGTCCCACAAGCCAAACGTTCTATTCTAAACGACTTGATAGCG
species | Physcomitrella patens |
transcript | PP1S7_15V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TTAAAAAATTGTCTCGTAAATATCTGCATGATGCTCTGACAATCGATTTG GTGGGGGAGAGTGATGAAAAGCTGGCGGACCGTATTAAGCTGTATGCTGTAEST: gi|162190176|gb|FC365918.1|FC365918
genomic: TTAAAAAATTGTCTCGTAAATATCTGCATGATGCTCTGACAATCGATTTGgtaagacgct ... cttcctgcagGTGGGGGAGAGTGATGAAAAGCTGGCGGACCGTATTAAGCTGTATGCTGTA
EST: TTAAAAAATTGTCTCGTAAATATCTGCATGATGCTCTGACAATCGATTTG GTGGGGGAGAGTGATGAAAAGCTGGCGGACCGTATTAAGCTGTATGCTGTAEST: gi|162194685|gb|FC370076.1|FC370076
genomic: TTAAAAAATTGTCTCGTAAATATCTGCATGATGCTCTGACAATCGATTTGgtaagacgct ... cttcctgcagGTGGGGGAGAGTGATGAAAAGCTGGCGGACCGTATTAAGCTGTATGCTGTA
EST: TAAAAAATTGTCTCG-AACATATCTGCATGATGCTCTGACAATCGATTTG GTGGGGGAGAGTGATGAAAAGCTGGCGGACCGTATTAAGCTGTATGCTGTA
genomic: TAAAAAATTGTCTCGTAA-ATATCTGCATGATGCTCTGACAATCGATTTGgtaagacgct ... cttcctgcagGTGGGGGAGAGTGATGAAAAGCTGGCGGACCGTATTAAGCTGTATGCTGTA
tcctattttcggcttgtcaggattaggtctaatctatgtcttgggcttcctgcagGTGGGGGAGAGTGATGAAAAGCTGGCGGACCGTATTAAGCTGTATGCTGTAGCGACAGTCCCACAAGCCAAACGTTCTATTCTAAACGACTTGATAGCG
gtctaat putative branch site (score: 15)
cttcctgc putative PPT
taatctat TA-rich tract