1 5' 3' | 2 5' 3' | 3 5' 3' |
...gaaatattgtattccatttaattgattacagtgccaccacatcattcgtttaatatcgtttctggatcagaccctaacgtatggaactgtcgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTGAAGATTCAGAAGTCCAAGGAGAAATTGGCTGCCAAGGCTCAATCTTAA
species | Physcomitrella patens |
transcript | PP1S76_47V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|37826981|gb|BJ584993.1|BJ584993
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|18368465|gb|BJ200550.1|BJ200550
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162158517|gb|FC334520.1|FC334520
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|7286626|gb|AW599113.1|AW599113
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162241774|gb|FC417301.1|FC417301
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|37844877|gb|BJ602885.1|BJ602885
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162254004|gb|FC430638.1|FC430638
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|15590644|gb|BI675260.1|BI675260
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAATTATTGTTCTEST: gi|67572280|gb|BJ945104.1|BJ945104
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162250297|gb|FC425951.1|FC425951
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162250298|gb|FC425952.1|FC425952
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|67698108|gb|BJ958341.1|BJ958341
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|37831299|gb|BJ589311.1|BJ589311
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|18351969|gb|BJ184021.1|BJ184021
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|7047040|gb|AW476934.1|AW476934
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|67699358|gb|BJ959591.1|BJ959591
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|15730030|gb|BI741625.1|BI741625
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162218513|gb|FC395090.1|FC395090
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|67721677|gb|BJ971936.1|BJ971936
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162230026|gb|FC405966.1|FC405966
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162229887|gb|FC404340.1|FC404340
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162272151|gb|FC447945.1|FC447945
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162272150|gb|FC447944.1|FC447944
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162199717|gb|FC375956.1|FC375956
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162206524|gb|FC382893.1|FC382893
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|67695648|gb|BJ955881.1|BJ955881
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|18360386|gb|BJ192448.1|BJ192448
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|18325041|gb|BJ157037.1|BJ157037
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|37838526|gb|BJ596534.1|BJ596534
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|67574690|gb|BJ947514.1|BJ947514
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162262257|gb|FC437168.1|FC437168
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|18360864|gb|BJ192927.1|BJ192927
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162206500|gb|FC382869.1|FC382869
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162206116|gb|FC383109.1|FC383109
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|67575874|gb|BJ948698.1|BJ948698
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162220744|gb|FC395513.1|FC395513
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162241775|gb|FC417302.1|FC417302
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|67701327|gb|BJ961560.1|BJ961560
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|15320128|gb|BI487719.1|BI487719
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|37849823|gb|BJ607831.1|BJ607831
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162241864|gb|FC418119.1|FC418119
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162240244|gb|FC415966.1|FC415966
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162151568|gb|FC327281.1|FC327281
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|18374313|gb|BJ205891.1|BJ205891
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|37838753|gb|BJ596761.1|BJ596761
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162265356|gb|FC440474.1|FC440474
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|22492578|gb|BU052501.1|BU052501
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|22132566|gb|BQ827229.1|BQ827229
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|67703168|gb|BJ963401.1|BJ963401
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGEST: gi|162269168|gb|FC445036.1|FC445036
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAG
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|162215229|gb|FC391634.1|FC391634
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|7583043|gb|AW699207.1|AW699207
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTEST: gi|67578429|gb|BJ950596.1|BJ950596
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
EST: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCG CATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
genomic: GTGAACCGCGCGTATGGTGGCACCATGGCAGGGTCTGCAGTGCGTGAGCGgtatgttaca ... cgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCT
tcgtttaatatcgtttctggatcagaccctaacgtatggaactgtcgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTGAAGATTCAGAAGTCCAAGGAGAAATTGGCTGCCAAGGCTCAATCTTAA
ccctaac putative branch site (score: 41)
taatat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gaaatattgtattccatttaattgattacagtgccaccacatcattcgtttaatatcgtttctggatcagaccctaacgtatggaactgtcgtgtttcagCATCATTCGAGCATTCCTTGTCGAGGAGCAGAAAATCGTAAAGAAGGTTCTGAAGATTCAGAAGTCCAAGGAGAAATTGGCTGCCAAGGCTCAATCTTAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA