1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtgcgcaatcaaaaactcatctcttctttattcattctaaacaatcgcctatgcaacagaatcaccaacgttgtgtcacatcattcttcatggccccgtaactctaatcaacagaatttgtaattgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCTTGCTTGCAGG
species | Physcomitrella patens |
transcript | PP1S76_20V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208367167|gb|DC935967.1|DC935967
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAEST: gi|208360091|gb|DC939339.1|DC939339
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCA
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATANGGGCGACTATCATCCTCANCGTCEST: gi|208391086|gb|DC933459.1|DC933459
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208363890|gb|DC943347.1|DC943347
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208390316|gb|DC942039.1|DC942039
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAEST: gi|208353634|gb|DC938743.1|DC938743
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGA
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATNGCAATANGGGCGACTATCATCCTCANCGTCEST: gi|208370852|gb|DC936890.1|DC936890
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208390998|gb|DC929317.1|DC929317
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATNGCA-TAGGGNCGACTATCATCCTCAACGTCEST: gi|208386873|gb|DC941577.1|DC941577
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208359616|gb|DC943172.1|DC943172
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208390907|gb|DC942225.1|DC942225
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208363449|gb|DC935242.1|DC935242
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGANT-GCAATAGGGGCGACTATCATCCTCA-CGTCEST: gi|208370092|gb|DC940385.1|DC940385
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATEST: gi|208392065|gb|DC941913.1|DC941913
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAAT
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208389268|gb|DC933296.1|DC933296
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208356993|gb|DC930023.1|DC930023
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATANGGGCGACTATCATCCTCANCGTCEST: gi|208355855|gb|DC930218.1|DC930218
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208368624|gb|DC939975.1|DC939975
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208386377|gb|DC937044.1|DC937044
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATNGCAATAGGGGCGACTATCATCCTCA-CGTCEST: gi|208388702|gb|DC941515.1|DC941515
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208357532|gb|DC934054.1|DC934054
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208357187|gb|DC942765.1|DC942765
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTGAT AATGGCGAGCTATCAGGANT-GCAATANGGGCGACTATCATCCTCA-CGTCEST: gi|208392541|gb|DC933941.1|DC933941
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208393397|gb|DC942495.1|DC942495
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGAAATTGCAATANGGGCGACTATCATCCTCANCGTCEST: gi|208367243|gb|DC939815.1|DC939815
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCANTAGGGGCGACTATCATCCTCA-CGTCEST: gi|208390857|gb|DC942203.1|DC942203
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208363630|gb|DC939793.1|DC939793
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208363344|gb|DC943566.1|DC943566
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208368474|gb|DC935997.1|DC935997
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATNGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208371052|gb|DC931540.1|DC931540
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208391100|gb|DC938130.1|DC938130
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208363854|gb|DC943311.1|DC943311
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208389585|gb|DC929468.1|DC929468
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT ANTGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208372919|gb|DC940550.1|DC940550
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCEST: gi|208372997|gb|DC940628.1|DC940628
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATNGCAATANGGGCCGACTATCATCCTCAACGTEST: gi|208369539|gb|DC936315.1|DC936315
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGC-GACTATCATCCTCAACGT
EST: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAAT AATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
genomic: GATTCAACCTCCTGTTCGTTGCGACGGCGGTGTCCACTGGTTCCAGTAATgtgcgcaatc ... ttgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTC
catcattcttcatggccccgtaactctaatcaacagaatttgtaattgggtgcagAATGGCGAGCTATCAGGAATTGCAATAGGGGCGACTATCATCCTCAACGTCTTGCTTGCAGG
ctctaat putative branch site (score: 3)
aatttgtaatt TA-rich tract