1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtagggtccctctcttcgcagccgctaatttgatggttcacaacgcacgattcctttctgtgattataattgaagggtgggtatgttggatataagatttactatgaagtcaaatttattttaacttctgtctttttttctgcagCACTCGTTCTGTCTATCTCTGTTGGCTGATTATCTGAAGCCTGGAAACGTTGTCCTCGACGTTGGTTCTGGATCGGGTTACCTCACCGCTGTATTCGGCC
species | Physcomitrella patens |
transcript | PP1S70_173V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GGTATGCAGCAACAATTTCTGCCCCCCACATG CACTCGTTCTGTCTATCTCTGTTGGCTGATTATCTGAAGCCTGGAAACGTTEST: gi|162164401|gb|FC341033.1|FC341033
genomic: GGTATGCAGCAACAATTTCTGCCCCCCACATGgtagggtccc ... ttttctgcagCACTCGTTCTGTCTATCTCTGTTGGCTGATTATCTGAAGCCTGGAAACGTT
EST: GGTATGCAGCAACAATTTCTGCCCCCCACATG CACTCGTTCTGTCTATCTCTGTTGGCTGATTATCTGAAGCCTGGAAACGTTEST: gi|37847957|gb|BJ605965.1|BJ605965
genomic: GGTATGCAGCAACAATTTCTGCCCCCCACATGgtagggtccc ... ttttctgcagCACTCGTTCTGTCTATCTCTGTTGGCTGATTATCTGAAGCCTGGAAACGTT
EST: GGTATGCAGCAACAATTTCTGCCCCCCACATG CACTCGTTCTGTCTATCTCTGTTGGCTGATTATCTGAAGCCTGGAAACGTTEST: gi|208376357|gb|DC932267.1|DC932267
genomic: GGTATGCAGCAACAATTTCTGCCCCCCACATGgtagggtccc ... ttttctgcagCACTCGTTCTGTCTATCTCTGTTGGCTGATTATCTGAAGCCTGGAAACGTT
EST: GGTATGCAGCAACAATTTCTGCCCCCCACATG CACTCGTTCTGTCTATCTCTGTTGGCTGATTATCTGAAGCCTGGAAACGTTEST: gi|37852933|gb|BJ610941.1|BJ610941
genomic: GGTATGCAGCAACAATTTCTGCCCCCCACATGgtagggtccc ... ttttctgcagCACTCGTTCTGTCTATCTCTGTTGGCTGATTATCTGAAGCCTGGAAACGTT
EST: GGTATGCAGCAACAATTTCTGCCCCCCACATG CACTCGTTCTGTCTATCTCTGTTGGCTGATTATCTGAAGCCTGGAAACGTTEST: gi|67718150|gb|BJ968409.1|BJ968409
genomic: GGTATGCAGCAACAATTTCTGCCCCCCACATGgtagggtccc ... ttttctgcagCACTCGTTCTGTCTATCTCTGTTGGCTGATTATCTGAAGCCTGGAAACGTT
EST: GGTATGCAGCAACAATTTCTGCCCCCCACATG CACTCGTTCTGTCTATCTCTGTTGGCTGATTATCTGAAGCCTGGAAACGTT
genomic: GGTATGCAGCAACAATTTCTGCCCCCCACATGgtagggtccc ... ttttctgcagCACTCGTTCTGTCTATCTCTGTTGGCTGATTATCTGAAGCCTGGAAACGTT
tataagatttactatgaagtcaaatttattttaacttctgtctttttttctgcagCACTCGTTCTGTCTATCTCTGTTGGCTGATTATCTGAAGCCTGGAAACGTTGTCCTCGACGTTGGTTCTGGATCGGGTTACCTCACCGCTGTATTCGGCC
ttttaac putative branch site (score: 14)
tttattttaacttctg CT-rich tract
atttactatgaagtca TA-rich tract