1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtacgttgtttcgacgtttcaatagaaacagtgttgtgcgtttgatcgcatattcctgagatccttcttcgtcgttgccagcagctaatttgagaatctgcttagagagacttaaacattgtttgaattgaggtttcggtgcagctccttgctgtgaaacactgtgctaactttaggtgtgttcagACATGCCTTGAAGCATATGAAAGAGGGTAGCTGTATTATTAATACGACTTCCGTTAATGCATTCAAGGGCAACACCACACTTCTAGACTACACTTCCACA
species | Physcomitrella patens |
transcript | PP1S6_369V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CTGGAGCGGACGTTCCGCACCAACATCTTCTCCCAGTTTTACCTCGTAAG ACATGCCTTGAAGCATATGAAAGAGGGTAGCTGTATTATTAATACGACTTCEST: gi|162261290|gb|FC437723.1|FC437723
genomic: CTGGAGCGGACGTTCCGCACCAACATCTTCTCCCAGTTTTACCTCGTAAGgtacgttgtt ... gtgtgttcagACATGCCTTGAAGCATATGAAAGAGGGTAGCTGTATTATTAATACGACTTC
EST: CTGGAGCGGACGTTCCGCACCAACATCTTCTCCCAGTTTTACCTCGTAAG ACATGCCTTGAAGCATATGAAAGAGGGTAGCTGTATTATTAATACGACTTCEST: gi|100442466|gb|BY963160.1|BY963160
genomic: CTGGAGCGGACGTTCCGCACCAACATCTTCTCCCAGTTTTACCTCGTAAGgtacgttgtt ... gtgtgttcagACATGCCTTGAAGCATATGAAAGAGGGTAGCTGTATTATTAATACGACTTC
EST: CTGGAGCGGACGTTCCGCACCAACATCTTCTCCCAGTTTTACCTCGTAAG ACATGCCTTGAAGCATATGAAAGAAGGTAGCTGTATTATTAATACGACTTC
genomic: CTGGAGCGGACGTTCCGCACCAACATCTTCTCCCAGTTTTACCTCGTAAGgtacgttgtt ... gtgtgttcagACATGCCTTGAAGCATATGAAAGAGGGTAGCTGTATTATTAATACGACTTC
ggtttcggtgcagctccttgctgtgaaacactgtgctaactttaggtgtgttcagACATGCCTTGAAGCATATGAAAGAGGGTAGCTGTATTATTAATACGACTTCCGTTAATGCATTCAAGGGCAACACCACACTTCTAGACTACACTTCCACA
tgctaac putative branch site (score: 1)
taacttta TA-rich tract