1 5' 3' | 2 5' 3' | 3 5' 3' |
...aacgagtcgcgtagatgagcattcccgcaatattttaacaagctctgttattagcaaatgaggagcatcttatattaatcattatctttctgttttgaagGGAAACTACAAAATAAAACTTCAGATCTTGGGAGAGCAAGGTGAACAGTTGGCATGTGCTTTCATCGACTTTAGCATTGTCTGGAATCATAGCGTTACTG
species | Physcomitrella patens |
transcript | PP1S69_198V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GGGAATTTGTTTTAATTAACACTCAAATCCTCCCAGGCATTACTCCACCG GGAAACTACAAAATAAAACTTCAGATCTTGGGAGAGCAAGGTGAACAGTTGEST: gi|162267870|gb|FC444471.1|FC444471
genomic: GGGAATTTGTTTTAATTAACACTCAAATCCTCCCAGGCATTACTCCACCGgtaagtgttg ... tgttttgaagGGAAACTACAAAATAAAACTTCAGATCTTGGGAGAGCAAGGTGAACAGTTG
EST: GGGAATTTGTTTTAATTAACACTCAAATCCTCCCAGGCATTACTCCACCG GGAAACTACAAAATAAAACTTCAGATCTTGGGAGAGCAAGGTGAACAGTTGEST: gi|67701519|gb|BJ961752.1|BJ961752
genomic: GGGAATTTGTTTTAATTAACACTCAAATCCTCCCAGGCATTACTCCACCGgtaagtgttg ... tgttttgaagGGAAACTACAAAATAAAACTTCAGATCTTGGGAGAGCAAGGTGAACAGTTG
EST: GGGAATTTGTTTTAATTAACACTCAAATCCTCCCAGGCATTACTCCACCG GGAAACTACAAAATAAAACTTCAGATCTTGGGAGAGCAAGGTGAACAGTTGEST: gi|162213663|gb|FC389743.1|FC389743
genomic: GGGAATTTGTTTTAATTAACACTCAAATCCTCCCAGGCATTACTCCACCGgtaagtgttg ... tgttttgaagGGAAACTACAAAATAAAACTTCAGATCTTGGGAGAGCAAGGTGAACAGTTG
EST: GGGAATTTGTTTTAATTAACACTCAAATCCTCCCAGGCATTACTCCACCG GGAAACTACAAAATAAAACTTCAGATCTTGGGAGAGCAAGGTGAACAGTTGEST: gi|162267871|gb|FC444472.1|FC444472
genomic: GGGAATTTGTTTTAATTAACACTCAAATCCTCCCAGGCATTACTCCACCGgtaagtgttg ... tgttttgaagGGAAACTACAAAATAAAACTTCAGATCTTGGGAGAGCAAGGTGAACAGTTG
EST: GGGAATTTGTTTTAATTAACACTCAAATCCTCCCAGGCATTACTCCACCG GGAAACTACAAAATAAAACTTCAGATCTTGGGAGAGCAAGGTGAACAGTTG
genomic: GGGAATTTGTTTTAATTAACACTCAAATCCTCCCAGGCATTACTCCACCGgtaagtgttg ... tgttttgaagGGAAACTACAAAATAAAACTTCAGATCTTGGGAGAGCAAGGTGAACAGTTG
tgttattagcaaatgaggagcatcttatattaatcattatctttctgttttgaagGGAAACTACAAAATAAAACTTCAGATCTTGGGAGAGCAAGGTGAACAGTTGGCATGTGCTTTCATCGACTTTAGCATTGTCTGGAATCATAGCGTTACTG
tattaat putative branch site (score: 19)
ttatctttctgtttt putative PPT
ttatattaatcattat TA-rich tract