1 5' 3' | 2 5' 3' | 3 5' 3' |
gtgtggtatcctaacatgaatgtttgtgaatagtatctgagtttaagtctcggttattttggctgttcgtgtcgtgtttttgaagttgagatccaatgtagattcacaacagtttgctgcttccgttcgactgattagttgtatccgcatgtctcgttttcgtgtgcagAGCGAACTTGAGGGTGGCAATGGGGAGGAGATGACAATGTCGCCTGGACACCAATTGCAACAGCATGGTCCAGCACAACAGCAATTTAGTGTAGTGGGTA
species | Physcomitrella patens |
transcript | PP1S63_97V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: ACCAAAATGGTTCCAATATTACCGTTGCACAAATCATTCACAATCTTCAG AGCGAACTTGAGGGTGGCAATGGGGAGGAGATGACAATGTCGCCTGGACACEST: gi|162246085|gb|FC423573.1|FC423573
genomic: ACCAAAATGGTTCCAATATTACCGTTGCACAAATCATTCACAATCTTCAGgtgtggtatc ... tcgtgtgcagAGCGAACTTGAGGGTGGCAATGGGGAGGAGATGACAATGTCGCCTGGACAC
EST: ACCAAAATGGTTCCAATATTACCGTTGCACAAATCATTCACAATCTTCAG AGCGAACTTGAGGGTGGCAATGGGGAGGAGATGACAATGTCGCCTGGACAC
genomic: ACCAAAATGGTTCCAATATTACCGTTGCACAAATCATTCACAATCTTCAGgtgtggtatc ... tcgtgtgcagAGCGAACTTGAGGGTGGCAATGGGGAGGAGATGACAATGTCGCCTGGACAC
tgctgcttccgttcgactgattagttgtatccgcatgtctcgttttcgtgtgcagAGCGAACTTGAGGGTGGCAATGGGGAGGAGATGACAATGTCGCCTGGACACCAATTGCAACAGCATGGTCCAGCACAACAGCAATTTAGTGTAGTGGGTA
gactgat putative branch site (score: 5)
tctcgttttc putative PPT
attagtt TA-rich tract