1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtgagcatatattctttgattgatctacttgcagtcaatatatattactcgacttgagaactctaaatttgattttgtaaactccagcttgctaggggggttaatgttaaaggaatgctaatagtcttgacagAACATGGCAGAGGCAGGAGTGGATGGTGCTGTTATTATTCAGCCCATCAACCACAAGTTCGATCATTCGTATGTCTCCAG
species | Physcomitrella patens |
transcript | PP1S568_5V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TTCCTGGGCAAGAACCAACTCTTCCTGGGAGTGCAGATTTTTTGCTGAAA AACATGGCAGAGGCAGGAGTGGATGGTGCTGTTATTATTCAGCCCATCAACEST: gi|208372392|gb|DC936494.1|DC936494
genomic: TTCCTGGGCAAGAACCAACTCTTCCTGGGAGTGCAGATTTTTTGCTGAAAgtgagcatat ... gtcttgacagAACATGGCAGAGGCAGGAGTGGATGGTGCTGTTATTATTCAGCCCATCAAC
EST: TTCCTGGGCAAGAACCAACTCTTCCTGGGAGTGCAGATTTTTTGCTGAAA AACATGGCAGAGGCAGGAGTGGATGGTGCTGTTATTATTCAGCCCATCAAC
genomic: TTCCTGGGCAAGAACCAACTCTTCCTGGGAGTGCAGATTTTTTGCTGAAAgtgagcatat ... gtcttgacagAACATGGCAGAGGCAGGAGTGGATGGTGCTGTTATTATTCAGCCCATCAAC
aaactccagcttgctaggggggttaatgttaaaggaatgctaatagtcttgacagAACATGGCAGAGGCAGGAGTGGATGGTGCTGTTATTATTCAGCCCATCAACCACAAGTTCGATCATTCGTATGTCTCCAG
tgctaat putative branch site (score: 2)
ttaatgttaaa TA-rich tract