1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gttagcttccgttctcagtagcattcaacttggtgcaatctgtgtatcccgtgtatcattttttgctgtgcaggacatgatggtcttcagttttacaaatgattatgaactacatctgacttctgccattctgtctgcagCATTCGTATTGTCTATCTCTGCTCGCTGATTATTTGAAGCCTGGAAGCATTGTCCTCGACGTAGGTTCTGGCTCTGGTTATCTCACTGCTGTCTTCGGCC
species | Physcomitrella patens |
transcript | PP1S55_159V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GTTATGGAGCAACAATTTCTGCGCCACACATG CATTCGTATTGTCTATCTCTGCTCGCTGATTATTTGAAGCCTGGAAGCATTEST: gi|162179521|gb|FC356561.1|FC356561
genomic: GTTATGGAGCAACAATTTCTGCGCCACACATGgttagcttcc ... ctgtctgcagCATTCGTATTGTCTATCTCTGCTCGCTGATTATTTGAAGCCTGGAAGCATT
EST: GTTATGGAGCAACAATTTCTGCGCCACACATG CATTCGTATTGTCTATCTCTGCTCGCTGATTATTTGAAGCCTGGAAGCATTEST: gi|162197970|gb|FC373985.1|FC373985
genomic: GTTATGGAGCAACAATTTCTGCGCCACACATGgttagcttcc ... ctgtctgcagCATTCGTATTGTCTATCTCTGCTCGCTGATTATTTGAAGCCTGGAAGCATT
EST: GTTATGGAGCAACAATTTCTGCGCCACACATG CATTCGTATTGTCTATCTCTGCTCGCTGATTATTTGAAGCCTGGAAGCATT
genomic: GTTATGGAGCAACAATTTCTGCGCCACACATGgttagcttcc ... ctgtctgcagCATTCGTATTGTCTATCTCTGCTCGCTGATTATTTGAAGCCTGGAAGCATT
ttcagttttacaaatgattatgaactacatctgacttctgccattctgtctgcagCATTCGTATTGTCTATCTCTGCTCGCTGATTATTTGAAGCCTGGAAGCATTGTCCTCGACGTAGGTTCTGGCTCTGGTTATCTCACTGCTGTCTTCGGCC
atctgac putative branch site (score: 3)
ttctgtct putative PPT
ttttacaaatgattat TA-rich tract