1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...ggctctggacacttagttcagctcccaaaggttcaaaccctaaatgacgtgacataatgagatcaaattgattcagcgatgattttatttttcctgacagGAAGAATCCCTTTCGCATATCTTGAGGATATCCACATGAGGTTTATGAAAAACTACGGAAAAGTGGCAAGCACAGCCTTGGCGTACACAATGAATGACGA
species | Physcomitrella patens |
transcript | PP1S52_233V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GAAAGCTGATGGCCTGACATTTCTTTGCATGGCTACTGATTCTTTTGGAA GAAGAATCCCTTTCGCATATCTTGAGGATATCCACATGAGGTTTATGANAAEST: gi|100396779|gb|BY953823.1|BY953823
genomic: GAAAGCTGATGGCCTGACATTTCTTTGCATGGCTACTGATTCTTTTGGAAgtaagagatc ... ttcctgacagGAAGAATCCCTTTCGCATATCTTGAGGATATCCACATGAGGTTTATGAAAA
EST: GAAAGCTGATGGCCTGACATTTCTTTGCATGGCTACTGATTCTTTTGGAA GAAGAATCCCTTTCGCATATCTTGAGGATATCCACATGAGGTTTATGAAAAEST: gi|162193407|gb|FC370973.1|FC370973
genomic: GAAAGCTGATGGCCTGACATTTCTTTGCATGGCTACTGATTCTTTTGGAAgtaagagatc ... ttcctgacagGAAGAATCCCTTTCGCATATCTTGAGGATATCCACATGAGGTTTATGAAAA
EST: GAAAGCTGATGGCCTGACATTTCTTTGCATGGCTACTGATTCTTTTGGAA GAAGAATCCCTTTCGCATATCTTGAGGATATCCACATGAGGTTTATGAAAA
genomic: GAAAGCTGATGGCCTGACATTTCTTTGCATGGCTACTGATTCTTTTGGAAgtaagagatc ... ttcctgacagGAAGAATCCCTTTCGCATATCTTGAGGATATCCACATGAGGTTTATGAAAA
gacgtgacataatgagatcaaattgattcagcgatgattttatttttcctgacagGAAGAATCCCTTTCGCATATCTTGAGGATATCCACATGAGGTTTATGAAAAACTACGGAAAAGTGGCAAGCACAGCCTTGGCGTACACAATGAATGACGA
aattgat putative branch site (score: 4)
ttttatttttcct putative PPT
atgattttattttt TA-rich tract