1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtattctcaggattttcatattggatatgatcgaggttttatttcgagatttcctgattttttcgttgtgggatacaataagtcttaagtatattgtccaaaccgtcttgcatcagcgaccgtctagtttcatctgacaatatagttggtatctaaatctacagGATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTGTCTCAGCCTACCGGCCCCTGGAATGGGGCTCAAGGTTACGTACAG
species | Physcomitrella patens |
transcript | PP1S4_215V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: ACGTGCGTCTATATTATGGTGCTCGCAACTTAGACCGAATGTCATACCAG GATAGATTTAAGGCCTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTGEST: gi|162264332|gb|FC440498.1|FC440498
genomic: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAGgtattctcag ... aaatctacagGATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTG
EST: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAG GATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTGEST: gi|18333863|gb|BJ165879.1|BJ165879
genomic: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAGgtattctcag ... aaatctacagGATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTG
EST: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAG GATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTGEST: gi|18332708|gb|BJ164721.1|BJ164721
genomic: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAGgtattctcag ... aaatctacagGATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTG
EST: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAG GATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTGEST: gi|162238939|gb|FC417703.1|FC417703
genomic: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAGgtattctcag ... aaatctacagGATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTG
EST: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAG GATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTGEST: gi|208371352|gb|DC944516.1|DC944516
genomic: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAGgtattctcag ... aaatctacagGATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTG
EST: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAG GATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTGEST: gi|100357608|gb|BY946481.1|BY946481
genomic: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAGgtattctcag ... aaatctacagGATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTG
EST: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAG GATAGATTTAAGGACTGGGAGGCATCAGGGGTTCEST: gi|162199675|gb|FC375914.1|FC375914
genomic: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAGgtattctcag ... aaatctacagGATAGATTTAAGGACTGGGAAGCATCAGGTGTTC
EST: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAG GATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTGEST: gi|67696462|gb|BJ956695.1|BJ956695
genomic: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAGgtattctcag ... aaatctacagGATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTG
EST: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAG GATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTGEST: gi|162238938|gb|FC417702.1|FC417702
genomic: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAGgtattctcag ... aaatctacagGATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTG
EST: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAG GATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTGEST: gi|162179827|gb|FC356418.1|FC356418
genomic: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAGgtattctcag ... aaatctacagGATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTG
EST: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAG GATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTGEST: gi|162264333|gb|FC440499.1|FC440499
genomic: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAGgtattctcag ... aaatctacagGATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTG
EST: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAG GATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTGEST: gi|162235909|gb|FC411652.1|FC411652
genomic: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAGgtattctcag ... aaatctacagGATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTG
EST: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAG GATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTGEST: gi|162199674|gb|FC375913.1|FC375913
genomic: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAGgtattctcag ... aaatctacagGATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTG
EST: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAG GATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTG
genomic: ACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAGgtattctcag ... aaatctacagGATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTG
gcatcagcgaccgtctagtttcatctgacaatatagttggtatctaaatctacagGATAGATTTAAGGACTGGGAAGCATCAGGTGTTCAAGTAATCCCTGTATTGTCTCAGCCTACCGGCCCCTGGAATGGGGCTCAAGGTTACGTACAG
atctaaa putative branch site (score: 20)
aatatagtt TA-rich tract