1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtgagtaacgggcctaattgttatcctctataggtgacgcattattagggaaatatgatttgtacaatgctaatgcattgacctgctatgcttctgagggtaatgttatgtttctttgtcgtttccagCTTTTCGAGTTAATGCAAGGAGGACAACAGCAGTCATATTATACGTCACATGGGCCATCTTCTGCCCCTGCTGTCTTCGCCAACCCTTGGGTTCGGCATT
species | Physcomitrella patens |
transcript | PP1S49_156V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TGATTATGGCATATCTCATCGTACTGAG CTTTTCGAGTTAATGCAAGGAGGACAACAGCAGTCATATTATACGTCACAT
genomic: TGATTATGGCATATCTCATCGTACTGAGgtgagtaacg ... tcgtttccagCTTTTCGAGTTAATGCAAGGAGGACAACAGCAGTCATATTATACGTCACAT
tgcattgacctgctatgcttctgagggtaatgttatgtttctttgtcgtttccagCTTTTCGAGTTAATGCAAGGAGGACAACAGCAGTCATATTATACGTCACATGGGCCATCTTCTGCCCCTGCTGTCTTCGCCAACCCTTGGGTTCGGCATT
cattgac putative branch site (score: 1)
tttctttgtcgtttcc putative PPT
taatgttat TA-rich tract