1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gcaagcagcgtcatgctcgatccacaataattccttgaatttgaagcactcgacagtagatatgaacgctatggaggctgtgagaatgtcatactgtgattggaaaattttggctgaaggtctaacaagatgaggtctgagtggctatgcagTTAACTTCGATGTTGGAACTGAACAACCTAGCTAGTCGCCGTCTACTCGCACCTCCCAGCGTACACCGAACTGATATACAACTGT
species | Physcomitrella patens |
transcript | PP1S48_57V6.2 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AGTACCTGACAATGCAAGACTTGGCGAGAATCCAGGCTGAAGCTGCACAG TTAACTTCGATGTTGGAACTGAACAACCTAGCTAGTCGCCGTCTACTCGCAEST: gi|100384943|gb|BY969678.1|BY969678
genomic: AGTACCTGACAATGCAAGACTTGGCGAGAATCCAGGCTGAAGCTGCACAGgcaagcagcg ... ggctatgcagTTAACTTCGATGTTGGAACTGAACAACCTAGCTAGTCGCCGTCTACTCGCA
EST: AGTACCTGACAATGCAAGACTTGGCGAGAATCCAGGCTGAAGCTGCACAG TTAACTTCGATGTTGGAACTGAACAACCTAGCTAGTCGCCGTCTACTCGCAEST: gi|18366577|gb|BJ198656.1|BJ198656
genomic: AGTACCTGACAATGCAAGACTTGGCGAGAATCCAGGCTGAAGCTGCACAGgcaagcagcg ... ggctatgcagTTAACTTCGATGTTGGAACTGAACAACCTAGCTAGTCGCCGTCTACTCGCA
EST: AGTACCTGACAATGCAAGACTTGGCGAGAATCCAGGCTGAAGCTGCACAG TTAACTTTCGATGTTGGAACTGAACAACCTAGCTAGTCGCCGTCTACTCGCEST: gi|19787903|gb|BQ040684.1|BQ040684
genomic: AGTACCTGACAATGCAAGACTTGGCGAGAATCCAGGCTGAAGCTGCACAGgcaagcagcg ... ggctatgcagTTAACTT-CGATGTTGGAACTGAACAACCTAGCTAGTCGCCGTCTACTCGC
EST: AGTACCTGACAATGCAAGACTTGGCGAGAATCCAGGCTGAAGCTGCACAG TTAACTTCGATGTTGGAACTGAACAACCTAGCTAGTCGCCGTCTACTCGCAEST: gi|18370166|gb|BJ201768.1|BJ201768
genomic: AGTACCTGACAATGCAAGACTTGGCGAGAATCCAGGCTGAAGCTGCACAGgcaagcagcg ... ggctatgcagTTAACTTCGATGTTGGAACTGAACAACCTAGCTAGTCGCCGTCTACTCGCA
EST: AGTACCTGACAATGCAAGACTTGGCGAGAATCCAGGCTGAAGCTGCACAG TTAACTTCGATGTTGGAACTGAACAACCTAGCTAGTCGCCGTCTACTCGCA
genomic: AGTACCTGACAATGCAAGACTTGGCGAGAATCCAGGCTGAAGCTGCACAGgcaagcagcg ... ggctatgcagTTAACTTCGATGTTGGAACTGAACAACCTAGCTAGTCGCCGTCTACTCGCA
gattggaaaattttggctgaaggtctaacaagatgaggtctgagtggctatgcagTTAACTTCGATGTTGGAACTGAACAACCTAGCTAGTCGCCGTCTACTCGCACCTCCCAGCGTACACCGAACTGATATACAACTGT
gtctaac putative branch site (score: 2)
aaaatttt TA-rich tract