1 5' 3' | 2 5' 3' | 3 5' 3' |
...tggttgaaattttacctatttatagcttgaacattgttataaccattggattaatgaggtcgaaccttcaaatctcaatctcattgtgtatgtttttcagAACGTGGATGGGGAGTCTCGTCCAGAGAAGTCAAATCCCGCGGAGCTCAAGAAAAAAGTGAGGAAAAAGGCAGTGGCATGCCCCGCGGTGCAGACTAGTC
species | Physcomitrella patens |
transcript | PP1S48_210V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TTGCAGATTACATTGAAGCAGCCTTTTGGCCGAAACCCCGTCCTGGTTGG AACGTGGATGGGGAGTCTCGTCCAGAGAAGTCAAATCCCGCGGAGCTCAAGEST: gi|67697741|gb|BJ957974.1|BJ957974
genomic: TTGCAGATTACATTGAAGCAGCCTTTTGGCCGAAACCCCGTCCTGGTTGGgtacgtattt ... tgtttttcagAACGTGGATGGGGAGTCTCGTCCAGAGAAGTCAAATCCCGCGGAGCTCAAG
EST: TTGCAGATTACATTGAAGCAGCCTTTTGGCCGAAACCCCGTCCTGGTTGG AACGTGGATGGGGAGTCTCGTCCAGAGAAGTCAAATCCCGCGGAGCTCAAG
genomic: TTGCAGATTACATTGAAGCAGCCTTTTGGCCGAAACCCCGTCCTGGTTGGgtacgtattt ... tgtttttcagAACGTGGATGGGGAGTCTCGTCCAGAGAAGTCAAATCCCGCGGAGCTCAAG
ttggattaatgaggtcgaaccttcaaatctcaatctcattgtgtatgtttttcagAACGTGGATGGGGAGTCTCGTCCAGAGAAGTCAAATCCCGCGGAGCTCAAGAAAAAAGTGAGGAAAAAGGCAGTGGCATGCCCCGCGGTGCAGACTAGTC
gattaat putative branch site (score: 7)
tgtttttc putative PPT
tatgttttt TA-rich tract