1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...ccgcgcatttgctggtaatttgttggaggagtttgtgagaagcttgcgagtcaccctcggaccttgcgagccattgctgatttgcgcatgctgttgccagGCCACATATATCCTTCTTTACAACAACTCCAAGCTGGGATGACTGGGGTGGAAGATCTCAAGCAGAAAGCCAAAGTTCAAGAGCGATACAGAAAACGTGA
species | Physcomitrella patens |
transcript | PP1S47_230V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CACGACAATGTCTACGCAGGAAAGGAAGGCCAGCCTCAGCGAATTCTATG GCCACATATATCCTTCTTTACAACAAEST: gi|100411813|gb|BY992354.1|BY992354
genomic: CACGACAATGTCTACGCAGGAAAGGAAGGCCAGCCTCAGCGAATTCTATGgtgcgagttt ... ctgttgccagGCCACATATATCCTTCTTTACAACAA
EST: ACGACAATGTCTACGCAGGAAAGGAAGGCCAGCCTCAGCNGA-TTCTATG GCCACATATATCCTTCTTTACAACAACTCCAAGCTGGGATGACTNGGGTGG
genomic: ACGACAATGTCTACGCAGGAAAGGAAGGCCAGCCTCAGC-GAATTCTATGgtgcgagttt ... ctgttgccagGCCACATATATCCTTCTTTACAACAACTCCAAGCTGGGATGACTGGGGTGG
gcgagtcaccctcggaccttgcgagccattgctgatttgcgcatgctgttgccagGCCACATATATCCTTCTTTACAACAACTCCAAGCTGGGATGACTGGGGTGGAAGATCTCAAGCAGAAAGCCAAAGTTCAAGAGCGATACAGAAAACGTGA
tgctgat putative branch site (score: 6)