1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...tttttttttttttttttttttttttttttttctcttctttccttccagaaaaaaatgttttatgatgtatcgattttccttgttttaatggcacgtttagACGGCGTCCTACAGCTGATGGACTGGAGAGTTCGCAGTCACAAGGGCGTCTGCAGCAGCAGCAGCAGCAGTTAGTTCCTGTTCAGGACAGTTACATGCAA
species | Physcomitrella patens |
transcript | PP1S47_13V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CACCNTTGGAGCA-TGGGACGGGGAGAAGCAATGAACTTTTCAGCTCAAG ACGGCGTCCTACAGCTGATGGACTGGGAGAGT-CGCAGTCACAAGGGCGTC
genomic: CACC-TTGGAGCAATGGGACGGGGAGAAGCAATGAACTTTTCAGCTCAAGgtaaccgccg ... gcacgtttagACGGCGTCCTACAGCTGATGGACTGG-AGAGTTCGCAGTCACAAGGGCGTC
cagaaaaaaatgttttatgatgtatcgattttccttgttttaatggcacgtttagACGGCGTCCTACAGCTGATGGACTGGAGAGTTCGCAGTCACAAGGGCGTCTGCAGCAGCAGCAGCAGCAGTTAGTTCCTGTTCAGGACAGTTACATGCAA
ttttaat putative branch site (score: 6)
aaaaatgttttatgat TA-rich tract