1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaagtacctcaagcatttcaacatgattgtttccaaagcacagttccgagcaccgataaaaaaaatctgtgtcatgagctatatcacgcaaacagttgtttgaattgttagaaccacttgcttgattggatacaacaactagtgatacaaaagtcatcgcttacaaagcagctacttgaatgtcaacagTGACCTGGACGGTGAAATGTTCGTATACTGAGCAATTGGCGCACAAAGCAGCAACTTGCTGTGTGTCTTTCTCAGCCTTTTACAATGAAACAATTGTGCC
species | Physcomitrella patens |
transcript | PP1S44_119V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CAAGACTAAATTCTTGTCTCCCAGTGGAAGACGAATTACGGAAGCCTTCA TGACCTGGACGGTGAAATGTTCGTATACTGAGCAATTGGCGCACAAAGCAG
genomic: CAAGACTAAATTCTTGTCTCCCAGTGGAAGACGAATTACGGAAGCCTTCAgtaagtacct ... atgtcaacagTGACCTGGACGGTGAAATGTTCGTATACTGAGCAATTGGCGCACAAAGCAG
acaactagtgatacaaaagtcatcgcttacaaagcagctacttgaatgtcaacagTGACCTGGACGGTGAAATGTTCGTATACTGAGCAATTGGCGCACAAAGCAGCAACTTGCTGTGTGTCTTTCTCAGCCTTTTACAATGAAACAATTGTGCC
cgcttac putative branch site (score: 26)
atacaaaa TA-rich tract