1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtatgaccaggttctgtagacttgattttttggcttaacgttcattttttattgcatagggatatttctacttcggtgggcatattggtctttaacctatttctgtttgcagAGCGTAGCCCCCCTATCGAAGAAGTAATTTCAGCAGGTGTCGTACCTCGTTTCGTTGAATTTCTAGTTCGAAGCGATTTCCCACAGTTACAG
species | Physcomitrella patens |
transcript | PP1S43_141V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TGCCATTCAATTGGAAGCAACCACACAATTTCGCAAGCTTCTGTCTATTG AGCGTAGCCCCCCTATCGAAGAAGTAATTTCAGCAGGTGTCGTACCTCGTTEST: gi|18373384|gb|BJ204962.1|BJ204962
genomic: TGCCATTCAATTGGAAGCAACCACACAATTTCGCAAGCTTCTGTCTATTGgtatgaccag ... ctgtttgcagAGCGTAGCCCCCCTATCGAAGAAGTAATTTCAGCAGGTGTCGTACCTCGTT
EST: TGCCATTCAATTGGAAGCAACCACACAATTTCGCAAGCTTCTGTCTATTG AGCGTAGCCCCCCTATCGAAGAAGTAATTTCAGCAGGTGTCGTACCTCGTT
genomic: TGCCATTCAATTGGAAGCAACCACACAATTTCGCAAGCTTCTGTCTATTGgtatgaccag ... ctgtttgcagAGCGTAGCCCCCCTATCGAAGAAGTAATTTCAGCAGGTGTCGTACCTCGTT
agggatatttctacttcggtgggcatattggtctttaacctatttctgtttgcagAGCGTAGCCCCCCTATCGAAGAAGTAATTTCAGCAGGTGTCGTACCTCGTTTCGTTGAATTTCTAGTTCGAAGCGATTTCCCACAGTTACAG
ctttaac putative branch site (score: 2)
cctatttct CT-rich tract
tatttcta TA-rich tract