1 5' 3' | 2 5' 3' | 3 5' 3' |
gtggattttatttgttttttctgctttcatttcgtgatgtttagtacttcaattgtcactcgactgctgtatttctattacctcaaattcttccccagctgtaggaatttgatacaacaaggcagtgtaagaattgaaatttccatctaaagcagattgttgctaattgcagGGTGGATGGATTTGACCTACCTCTGCAAATGGTCGTCGGAGCTGCAGAGGCTATGGCCATCTTGACAGCAGCCCAAGACCGGCGAAGCCGCAGGCCAGTG
species | Physcomitrella patens |
transcript | PP1S42_184V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AAAGTTGTGGCTCTGGCACAGGCCGGCGATGGGGCAGTTCTCTTTCTAGG GGTGGATGGATTTGACCTACCTCTGCAAATGGTCGTCGGAGCTGCAGAGGCEST: gi|100389998|gb|BY989078.1|BY989078
genomic: AAAGTTGTGGCTCTGGCACAGGCCGGCGATGGGGCAGTTCTCTTTCTAGGgtggatttta ... ctaattgcagGGTGGATGGATTTGACCTACCTCTGCAAATGGTCGTCGGAGCTGCAGAGGC
EST: AAAGTTGTGGCTCTGGCACAGGCCGGCGATGGGGCAGTTCTCTTTCTAGG GGTGGATGGATTTGACCTACCTCTGCAAAEST: gi|208390571|gb|DC937503.1|DC937503
genomic: AAAGTTGTGGCTCTGGCACAGGCCGGCGATGGGGCAGTTCTCTTTCTAGGgtggatttta ... ctaattgcagGGTGGATGGATTTGACCTACCTCTGCAAA
EST: AAAGTTGTGGCTCTGGCACAGGCCGGCGATGGGGCAGTTCTCTTTCTAGG GGTGGATGGATTTGACCTACCTCTGCAAATGGTCGTCGGAGCTGCAGAGGCEST: gi|208386404|gb|DC937071.1|DC937071
genomic: AAAGTTGTGGCTCTGGCACAGGCCGGCGATGGGGCAGTTCTCTTTCTAGGgtggatttta ... ctaattgcagGGTGGATGGATTTGACCTACCTCTGCAAATGGTCGTCGGAGCTGCAGAGGC
EST: AAAGTTGTGGCTCTGGCACAGGCCGGCGATGGGGCAGTTCTCTTTCTAGG GGTGGATGGATTTGACCTACCTCTGCAAATGGTCGTCGGAGCTGCAGAGGC
genomic: AAAGTTGTGGCTCTGGCACAGGCCGGCGATGGGGCAGTTCTCTTTCTAGGgtggatttta ... ctaattgcagGGTGGATGGATTTGACCTACCTCTGCAAATGGTCGTCGGAGCTGCAGAGGC
caaggcagtgtaagaattgaaatttccatctaaagcagattgttgctaattgcagGGTGGATGGATTTGACCTACCTCTGCAAATGGTCGTCGGAGCTGCAGAGGCTATGGCCATCTTGACAGCAGCCCAAGACCGGCGAAGCCGCAGGCCAGTG
tgctaat putative branch site (score: 16)
taagaattgaaattt TA-rich tract