1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtaatattatccctattatagtctgacgaagttgtggggttgtattacagacttcttgacaaaagccatacgcttttgttcagaggtccctgctgatggttcgtctgtttggggtctttcgacctgctgctggtcttcagagaacatttccacaagggtaatctaactttttatggggttggaaattcagGTGGTCAGTGGTATCAACAAAGGCTCCAACTGTGGTTACCACAT
species | Physcomitrella patens |
transcript | PP1S425_16V6.2 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TCTCGTTGGCATTGACATCGTCTATTTTCCCATGGGCGAAACCGACCTTG GTGGTCAGTGGTATCAACAAAGGCTCCAACTGTGGTTACCACATEST: gi|162186160|gb|FC361364.1|FC361364
genomic: TCTCGTTGGCATTGACATCGTCTATTTTCCCATGGGCGAAACCGACCTTGgtaatattat ... ggaaattcagGTGGTCAGTGGTATCAACAAAGGCTCCAACTGTGGTTACCACAT
EST: TCTCGTTGGCATTGACATCGTCTATTTTCCCATGGGCGAAACCGACCTTG GTGGTCAGTGGTATCAACAAAGGCTCCAACTGTGGTTACCACATEST: gi|100442509|gb|BY963203.1|BY963203
genomic: TCTCGTTGGCATTGACATCGTCTATTTTCCCATGGGCGAAACCGACCTTGgtaatattat ... ggaaattcagGTGGTCAGTGGTATCAACAAAGGCTCCAACTGTGGTTACCACAT
EST: TCTCGTTGGCATTGACATCGTCTATTTTCCCATGGGCGAAACCGACCTTG GTGGTCAGTGGTATCAACAAAGGCTCCAACTGTGGTTACCACATEST: gi|162265882|gb|FC442885.1|FC442885
genomic: TCTCGTTGGCATTGACATCGTCTATTTTCCCATGGGCGAAACCGACCTTGgtaatattat ... ggaaattcagGTGGTCAGTGGTATCAACAAAGGCTCCAACTGTGGTTACCACAT
EST: TCTCGTTGGCATTGACATCGTCTATTTTCCCATGGGCGAAACCGACCTTG GTGGTCAGTGGTATCAACAAAGGCTCCAACTGTGGTTACCACAT
genomic: TCTCGTTGGCATTGACATCGTCTATTTTCCCATGGGCGAAACCGACCTTGgtaatattat ... ggaaattcagGTGGTCAGTGGTATCAACAAAGGCTCCAACTGTGGTTACCACAT
ttcagagaacatttccacaagggtaatctaactttttatggggttggaaattcagGTGGTCAGTGGTATCAACAAAGGCTCCAACTGTGGTTACCACAT
atctaac putative branch site (score: 2)
taatctaactttttat TA-rich tract