Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagcatattttcagtgggacattggtcgaactagtgttgggtaacttgtaagcaatcttttgcggcagagttgttgaaccatacctgttagggcacttcttgactactcttcttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTGATAGAGAGCGCATTCCAGAGCGTGTGGTGCATGCACGAGGTGCTAGCGC

Basic information

species Physcomitrella patens
transcript PP1S3_353V6.2
intron # 3
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|100397012|gb|BY953940.1|BY953940
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100413461|gb|BY956682.1|BY956682
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACGATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100401878|gb|BY954755.1|BY954755
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|18355910|gb|BJ187969.1|BJ187969
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|208366827|gb|DC940141.1|DC940141
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100388487|gb|BY952089.1|BY952089
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100389395|gb|BY988873.1|BY988873
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|18355527|gb|BJ187586.1|BJ187586
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100441770|gb|BY962861.1|BY962861
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|208390381|gb|DC933426.1|DC933426
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCACTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100437950|gb|BY961577.1|BY961577
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100388313|gb|BY951915.1|BY951915
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100413391|gb|BY956648.1|BY956648
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100415088|gb|BY975158.1|BY975158
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|208397839|gb|DC912034.1|DC912034
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|18342457|gb|BJ174492.1|BJ174492
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100431352|gb|BY960153.1|BY960153
EST:     GGGAGCGCCAGTATGGAACGACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|162269381|gb|FC445249.1|FC445249
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|208384128|gb|DC911264.1|DC911264
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100422959|gb|BY958085.1|BY958085
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100373522|gb|BY948971.1|BY948971
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100425186|gb|BY977016.1|BY977016
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100441216|gb|BY980837.1|BY980837
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTCGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100399198|gb|BY954249.1|BY954249
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|18371161|gb|BJ202763.1|BJ202763
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100385814|gb|BY951008.1|BY951008
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100355998|gb|BY946143.1|BY946143
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100403993|gb|BY955201.1|BY955201
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|208392447|gb|DC907924.1|DC907924
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100356632|gb|BY965202.1|BY965202
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|67508120|gb|BJ940991.1|BJ940991
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100369670|gb|BY948592.1|BY948592
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|208376904|gb|DC906845.1|DC906845
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|208387941|gb|DC932865.1|DC932865
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|162190690|gb|FC367576.1|FC367576
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100402105|gb|BY973219.1|BY973219
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|67573397|gb|BJ946221.1|BJ946221
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|18359723|gb|BJ191784.1|BJ191784
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100449037|gb|CJ973336.1|CJ973336
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100452195|gb|CJ975149.1|CJ975149
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100385323|gb|BY950915.1|BY950915
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100388606|gb|BY970754.1|BY970754
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|208397130|gb|DC908144.1|DC908144
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|18325053|gb|BJ157049.1|BJ157049
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100429808|gb|BY978099.1|BY978099
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|18330124|gb|BJ162130.1|BJ162130
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100400264|gb|BY954390.1|BY954390
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100389047|gb|BY952251.1|BY952251
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100445088|gb|BY964387.1|BY964387
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|208400560|gb|DC904536.1|DC904536
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|18353592|gb|BJ185647.1|BJ185647
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100426840|gb|BY977389.1|BY977389
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100385394|gb|BY950986.1|BY950986
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100451699|gb|CJ974897.1|CJ974897
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|18372249|gb|BJ203851.1|BJ203851
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100417386|gb|BY957305.1|BY957305
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100354185|gb|BY945750.1|BY945750
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100378557|gb|BY968659.1|BY968659
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|18367606|gb|BJ199689.1|BJ199689
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|18373044|gb|BJ204646.1|BJ204646
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100413876|gb|BY975017.1|BY975017
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100394319|gb|BY972022.1|BY972022
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100430614|gb|BY978308.1|BY978308
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|208348570|gb|DC905835.1|DC905835
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|67507546|gb|BJ940428.1|BJ940428
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100367504|gb|BY984724.1|BY984724
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|208398062|gb|DC904367.1|DC904367
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|100443885|gb|BY982113.1|BY982113
EST:     GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
EST: gi|18355811|gb|BJ187870.1|BJ187870
EST:     NGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGNTGGTCCTAGAG                         GTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG
genomic: GGGAGCGCCAGTATGGAACAACAACAATTCTCTCACAGTTGGTCCTAGAGgtaagcatat ... ttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gagttgttgaaccatacctgttagggcacttcttgactactcttcttttatccagGTCCGGTCCTCTTGGAGGACTACCATTTGGTGGAGAAGTTGGCGCAATTTGATAGAGAGCGCATTCCAGAGCGTGTGGTGCATGCACGAGGTGCTAGCGC
                              tcttgac  putative branch site (score: 3)
                            cttcttgactactctt  CT-rich tract
                                          ttcttttat  TA-rich tract