1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
...atcgtaagtgaaataaaaataagcattctgtttgccgaaatccaatttacgtgctgtgattaccgggacctgacgtctatgaactttgaattgtatgcagGGTGACCTAGCAAGGACAATACAGTCTGTGCTGTTCGTGAATGCGATCAATACTCTGGTGCAAACATACTTTGGTACAAGACTGCCGGTGGTAATGGGAA
species | Physcomitrella patens |
transcript | PP1S297_61V6.2 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CATCTGTGCTGATTCCACTCACTGTCATACGAGCGATCGGTGGAGAAGCG GGTGACCTAGCAAGGACAATACAGTCTGTGCTGTTCGTGAATGCGATCAATEST: gi|18331080|gb|BJ163086.1|BJ163086
genomic: CATCTGTGCTGATTCCACTCACTGTCATACGAGCGATCGGTGGAGAAGCGgtgcaacacg ... ttgtatgcagGGTGACCTAGCAAGGACAATACAGTCTGTGCTGTTCGTGAATGCGATCAAT
EST: CATCTGTGCTGATTCCACTCACTGTCATACGAGCGATCGGTGGAGAAGCG GGTGACCTANCAAGGACAATACAGTCTGTGCTGTTCGTGAATGCGATCAATEST: gi|100358287|gb|BY965567.1|BY965567
genomic: CATCTGTGCTGATTCCACTCACTGTCATACGAGCGATCGGTGGAGAAGCGgtgcaacacg ... ttgtatgcagGGTGACCTAGCAAGGACAATACAGTCTGTGCTGTTCGTGAATGCGATCAAT
EST: CATCTGTGCTGATTCCACTCACTGTCATACGAGCGATCGGTGGAGAAGCG GGTGACCTAGCAAGGACAATACAGTCTGTGCTGTTCGTGAATGCGATCAAT
genomic: CATCTGTGCTGATTCCACTCACTGTCATACGAGCGATCGGTGGAGAAGCGgtgcaacacg ... ttgtatgcagGGTGACCTAGCAAGGACAATACAGTCTGTGCTGTTCGTGAATGCGATCAAT
tttacgtgctgtgattaccgggacctgacgtctatgaactttgaattgtatgcagGGTGACCTAGCAAGGACAATACAGTCTGTGCTGTTCGTGAATGCGATCAATACTCTGGTGCAAACATACTTTGGTACAAGACTGCCGGTGGTAATGGGAA
acctgac putative branch site (score: 4)
tttgaatt TA-rich tract