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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagtcaccatttgtactcgaagtgccaaataggcttggaattggcgtcttgctaactggctataaacttgtgtttttcagttgtttgcactgaacataaaactgacatcgccaccattattattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGGCAAGCAGGACAAGTGCCGCACCGCCTTGACCGACAACAGTGTCATTGAG

Basic information

species Physcomitrella patens
transcript PP1S28_10V6.2
intron # 3
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208366602|gb|DC954882.1|DC954882
EST:     -ANGCCACCGTAAACATG-TGCGCA-GGNTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|7147733|gb|AW509598.1|AW509598
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|19784792|gb|BQ040234.1|BQ040234
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|67693014|gb|BJ953247.1|BJ953247
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|162213471|gb|FC389148.1|FC389148
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|162202534|gb|FC380049.1|FC380049
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|162272020|gb|FC448438.1|FC448438
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|162261690|gb|FC438123.1|FC438123
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|18351768|gb|BJ183820.1|BJ183820
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAG
EST: gi|67720481|gb|BJ970740.1|BJ970740
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|67727087|gb|BJ977346.1|BJ977346
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGCTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|162261689|gb|FC438122.1|FC438122
EST:     AAGGCCCCCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|37849191|gb|BJ607199.1|BJ607199
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|6167223|gb|AW145487.1|AW145487
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|18340297|gb|BJ172325.1|BJ172325
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|162278231|gb|FC454570.1|FC454570
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|208388632|gb|DC953422.1|DC953422
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|67718670|gb|BJ968929.1|BJ968929
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGCTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|18327583|gb|BJ159586.1|BJ159586
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|208362232|gb|DC939656.1|DC939656
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|67704547|gb|BJ964780.1|BJ964780
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|67719402|gb|BJ969661.1|BJ969661
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|67717180|gb|BJ967439.1|BJ967439
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|18375138|gb|BJ206716.1|BJ206716
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAA
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAA
EST: gi|162202533|gb|FC380048.1|FC380048
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|67725699|gb|BJ975958.1|BJ975958
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|162278230|gb|FC454569.1|FC454569
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|7287015|gb|AW599502.1|AW599502
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|67572712|gb|BJ945536.1|BJ945536
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|67569747|gb|BJ942571.1|BJ942571
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|208382639|gb|DC923239.1|DC923239
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|162253343|gb|FC429769.1|FC429769
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|18362781|gb|BJ194852.1|BJ194852
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAA
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAA
EST: gi|7583152|gb|AW699316.1|AW699316
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|67720482|gb|BJ970741.1|BJ970741
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|208347105|gb|DC909375.1|DC909375
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|162263668|gb|FC440126.1|FC440126
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|67727691|gb|BJ977950.1|BJ977950
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|162272021|gb|FC448439.1|FC448439
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|162263669|gb|FC440127.1|FC440127
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|162253342|gb|FC429768.1|FC429768
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|208373902|gb|DC940413.1|DC940413
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|162213472|gb|FC389149.1|FC389149
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|208392037|gb|DC941885.1|DC941885
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
EST: gi|37831104|gb|BJ589116.1|BJ589116
EST:     AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGG                         ATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG
genomic: AAGGCCACCGTAAACATGTTGCGCAGGGTTGAGCCTTACGTAACCTACGGgtgagtcacc ... ttattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttcagttgtttgcactgaacataaaactgacatcgccaccattattattttcagATACCCCAATCTGAAAACTGTCAGGGAGTTGATTTACAAGCGCGGTTATGGCAAGCAGGACAAGTGCCGCACCGCCTTGACCGACAACAGTGTCATTGAG
                         aactgac  putative branch site (score: 2)
                                             ttattttc  putative PPT
                                         attattattttca  TA-rich tract