1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtatgttgtcttctccagattattctctttgtactcttatacttgattctttttaatttaatttcaattcttagaagagtgggttcaaggttgccttgttgattttaattagtttttcgacataatgcagGTGGGGTTCAACATGCGTAAGGTGACGAAAGGCAGTGTAACCATCAAGCTTTGGGATCTCGGTGGTCAACCTCGTTTCCGAAGCATGTGGGAGCGATATT
species | Physcomitrella patens |
transcript | PP1S263_59V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TCCGGTGGCTTCACTGAAGACATGATACCCACG GTGGGGTTCAACATGCGTAAGGTGACGAAAGGCAGTGTAACCATCAAGCTT
genomic: TCCGGTGGCTTCACTGAAGACATGATACCCACGgtatgttgtc ... cataatgcagGTGGGGTTCAACATGCGTAAGGTGACGAAAGGCAGTGTAACCATCAAGCTT
agagtgggttcaaggttgccttgttgattttaattagtttttcgacataatgcagGTGGGGTTCAACATGCGTAAGGTGACGAAAGGCAGTGTAACCATCAAGCTTTGGGATCTCGGTGGTCAACCTCGTTTCCGAAGCATGTGGGAGCGATATT
ttttaat putative branch site (score: 6)
ttgttgattttaatta TA-rich tract