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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtttgaagttcgtttccttgtgtttttatctggtgtttttatcatgtttatcacgtgccttgccctttcactagtatttctaccaaaatattaacttgttagaagactgtacggactcgtcaattactttctactaccttgaattgttgtaacacgaattgcttttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAGGCAGTGGGGTCAGTCATGACCAACAAGTACAGTGAGGGTTACCCCGGGG

Basic information

species Physcomitrella patens
transcript PP1S21_270V6.1
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S21_270V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: LOC_Os03g52840.2 (Oryza sativa), 3'ss of exon 3
gtttgaagttcgtttccttgtgtttttatctggtgtttttatcatgtttatcacgtgccttgccctttcactagtatttctaccaaaatattaacttgttagaagactgtacg-gactcgtcaattactttctactaccttgaattgttgtaacacgaattgcttttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAGGCAGTGGGGTCAGTCATGACCAACAAGTACAGTGAGGGTTACCCCGGGG
                                                                                     ||  |  |||     | || |  || || |  | ||  | |  ||  | |  |   | |||| || |    |     || ||  ||| ||||||||||| | ||||| || || |||||||||||  | ||||| |||||||| ||||| || |||||||||||||||||||| ||||| |||||||| |
-----------------------------------------------------------------------------------gtaaccagcaaccaccaaaaaaaaagtgcgtggattgttcagtgtttggtccaccgacgcattgctgaattgtggcaatctgtttggtgcagGGTCTGGAGCTCATCCCGTCGGAGAACTTCACCTCGGTGTCAGTGATGCAGGCGGTGGGATCCGTCATGACCAACAAGTACAGCGAGGGGTACCCCGGCG

upper sequence: PP1S21_270V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: GRMZM2G135283_T01 (Zea mays), 3'ss of exon 3
gtttgaagttcgtttccttgtgtttttatctggtgtttttatcatgtttatcacgtgccttgccctttcactagtatttctaccaaaatattaacttgttagaagactgtacggactcgtcaattactttctactacctt---gaattgttgtaacacgaattgcttttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAGGCAGTGGGGTCAGTCATGACCAACAAGTACAGTGAGGGTTACCCCGGGG
              ||| ||| | || |    ||  | || || | |     |||| |  |   |  ||| |   | |||| |  |   |||   ||||| ||  |   ||     |  |   ||  |||| |  ||| |   || || |         |||   | |  || | ||||||||||| | ||||| || || || ||||| ||  | ||||| |||||||||||||| || |||||||||||||||||||| ||||| ||||| || |
-------------gtccctgtttcttca----gtcatcttttcctat-----acgtactcttttcagtcatttccacttctcc--agtcattgttttgttggattatatta-----ttatttgtttttttccaagaccctactgagttctgtccgtgtcaatgcgtctggtg-gcagGGTCTGGAGCTCATCCCGTCGGAGAATTTCACGTCGGTGTCAGTGATGCAGGCAGTGGGTTCCGTCATGACCAACAAGTACAGCGAGGGGTACCCTGGCG

upper sequence: PP1S21_270V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: EDO97448 (Chlamydomonas reinhardtii), 3'ss of exon 4
gtttgaagttcgtttccttgtgtttttatctggtgtttttatcatgtttatcacgtgccttgccctttcactagtatttctaccaaaatattaacttgttagaagactgtacggactcgtcaattactttctactaccttgaattgttgtaacacgaattgcttttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAGGCAGTGGGGTCAGTCATGACCAACAAGTACAGTGAGGGTTACCCCGGGG
                  || |  |   |  || | || |||    ||   |     |  | | | | |||  | |   || ||   ||   | | ||     || |||| |   |      || ||| |   |   ||||    ||   ||      | | ||  |  |  |||| |||||| ||||||| || || ||||||   ||   ||| || ||| |||| |||||    |||||||||||||||||||| ||||| |||||||| |
-----------------gtgcgcctgc-tacggggcttctatttccttcccc-----ctctccacctgcacacgcaggcctgcctccattgcagcatgcctacagcctgtccatgc------atcactctaaccgcacttggcacgta--aatggctctggtttggccatacagGGCCTGGAGCTGATCCCCTCGGAGAACTTCGTGTCTGCCTCGGTGATGGAGGCGGTGGGCAGCGTCATGACCAACAAGTACAGCGAGGGCTACCCCGGCG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162165542|gb|FC340653.1|FC340653
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100425833|gb|BY977143.1|BY977143
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18343391|gb|BJ175429.1|BJ175429
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18344728|gb|BJ176769.1|BJ176769
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162223942|gb|FC398948.1|FC398948
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|67574572|gb|BJ947396.1|BJ947396
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162170713|gb|FC346300.1|FC346300
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162196160|gb|FC374320.1|FC374320
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18365928|gb|BJ198006.1|BJ198006
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18328931|gb|BJ160937.1|BJ160937
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18373909|gb|BJ205487.1|BJ205487
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100376447|gb|BY986171.1|BY986171
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|67574738|gb|BJ947562.1|BJ947562
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100445191|gb|BY964490.1|BY964490
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|67573841|gb|BJ946665.1|BJ946665
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162177205|gb|FC352634.1|FC352634
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100417315|gb|BY957272.1|BY957272
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162168761|gb|FC344751.1|FC344751
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162181782|gb|FC357381.1|FC357381
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162170818|gb|FC347432.1|FC347432
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|67570944|gb|BJ943768.1|BJ943768
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18351483|gb|BJ183535.1|BJ183535
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162230450|gb|FC407391.1|FC407391
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162271841|gb|FC448974.1|FC448974
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162241441|gb|FC418580.1|FC418580
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162200866|gb|FC377061.1|FC377061
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18362094|gb|BJ194161.1|BJ194161
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCANAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18347395|gb|BJ179441.1|BJ179441
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162273886|gb|FC450025.1|FC450025
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|208396859|gb|DC908179.1|DC908179
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162157150|gb|FC333720.1|FC333720
EST:     CGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: CGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162157403|gb|FC333492.1|FC333492
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100371284|gb|BY986028.1|BY986028
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18368736|gb|BJ200821.1|BJ200821
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162265170|gb|FC441257.1|FC441257
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162184252|gb|FC360493.1|FC360493
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162199804|gb|FC376397.1|FC376397
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|208363337|gb|DC943559.1|DC943559
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|161978985|gb|EE296269.1|EE296269
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18327272|gb|BJ159274.1|BJ159274
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162157748|gb|FC335462.1|FC335462
EST:     GAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: GAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162188007|gb|FC364997.1|FC364997
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18325516|gb|BJ157513.1|BJ157513
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18368091|gb|BJ200176.1|BJ200176
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18363315|gb|BJ195387.1|BJ195387
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162172762|gb|FC348351.1|FC348351
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18362205|gb|BJ194275.1|BJ194275
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100378444|gb|BY968601.1|BY968601
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100424576|gb|BY976709.1|BY976709
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100401727|gb|BY954677.1|BY954677
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|67577683|gb|BJ949850.1|BJ949850
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCA
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCA
EST: gi|162179299|gb|FC356248.1|FC356248
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162185211|gb|FC361721.1|FC361721
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18348856|gb|BJ180905.1|BJ180905
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162229758|gb|FC404029.1|FC404029
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18328813|gb|BJ160819.1|BJ160819
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162180252|gb|FC355569.1|FC355569
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162188408|gb|FC364278.1|FC364278
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|208377930|gb|DC910948.1|DC910948
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18361206|gb|BJ193271.1|BJ193271
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100377867|gb|BY986433.1|BY986433
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100356141|gb|BY946217.1|BY946217
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100396783|gb|BY953825.1|BY953825
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100411150|gb|BY956345.1|BY956345
EST:     ATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|67574927|gb|BJ947751.1|BJ947751
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100379028|gb|BY986538.1|BY986538
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162198596|gb|FC374768.1|FC374768
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162173735|gb|FC349911.1|FC349911
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18331215|gb|BJ163224.1|BJ163224
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100387869|gb|BY970614.1|BY970614
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18366910|gb|BJ198990.1|BJ198990
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162179937|gb|FC356008.1|FC356008
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|67702369|gb|BJ962602.1|BJ962602
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162178979|gb|FC354287.1|FC354287
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100401795|gb|BY954712.1|BY954712
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162211794|gb|FC387458.1|FC387458
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162191214|gb|FC367892.1|FC367892
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100378434|gb|BY968595.1|BY968595
EST:     ACCCTGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18356747|gb|BJ188806.1|BJ188806
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|208400102|gb|DC904750.1|DC904750
EST:     ACCCTGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|67569700|gb|BJ942524.1|BJ942524
EST:     ACCCCGAGATTGTCGACATCATCGAACATGANAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162154208|gb|FC330339.1|FC330339
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18357580|gb|BJ189639.1|BJ189639
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGC
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGC
EST: gi|18355879|gb|BJ187938.1|BJ187938
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162161116|gb|FC336464.1|FC336464
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100390306|gb|BY952714.1|BY952714
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18329834|gb|BJ161840.1|BJ161840
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18331379|gb|BJ163390.1|BJ163390
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18325744|gb|BJ157741.1|BJ157741
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18366526|gb|BJ198605.1|BJ198605
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100445798|gb|CJ970097.1|CJ970097
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162225773|gb|FC400713.1|FC400713
EST:     CGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: CGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162161651|gb|FC339066.1|FC339066
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162276986|gb|FC453084.1|FC453084
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162240980|gb|FC416611.1|FC416611
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18369394|gb|BJ201480.1|BJ201480
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162165549|gb|FC340660.1|FC340660
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18368654|gb|BJ200739.1|BJ200739
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100416637|gb|BY975483.1|BY975483
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100446449|gb|CJ970748.1|CJ970748
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18353687|gb|BJ185742.1|BJ185742
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGA
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGA
EST: gi|18363212|gb|BJ195284.1|BJ195284
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162187097|gb|FC362879.1|FC362879
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162195879|gb|FC375612.1|FC375612
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|208361638|gb|DC942867.1|DC942867
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162162498|gb|FC339216.1|FC339216
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18348471|gb|BJ180520.1|BJ180520
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162170542|gb|FC347675.1|FC347675
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18363866|gb|BJ195938.1|BJ195938
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|162173000|gb|FC348638.1|FC348638
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|100366230|gb|BY967344.1|BY967344
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18344558|gb|BJ176599.1|BJ176599
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|208361637|gb|DC942866.1|DC942866
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
EST: gi|18368130|gb|BJ200215.1|BJ200215
EST:     ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAG                         GGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG
genomic: ACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 158

TGGCCGAAGCAACTGAATGCCGACATCTCCGAGGTTGACCCCGAGATTGTCGACATCATCGAACATGAGAAGAACCGTCAATACAAGgtttgaagtt ... ttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAGGCAGTGGGGTCAGTCATGACCAACAAGTACAGTGAGGGTTACCCCGGGG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcaattactttctactaccttgaattgttgtaacacgaattgcttttctgtgtagGGTCTGGAGTTGATCCCATCAGAAAACTTCACCTCCCTCTCAGTTATGCAGGCAGTGGGGTCAGTCATGACCAACAAGTACAGTGAGGGTTACCCCGGGG
                           ttgtaac  putative branch site (score: 158)
                                       ttgcttttct  putative PPT
                   ttgaatt  TA-rich tract