Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagtaaatctgccactcagtgtcctacaggggattttccagcccatgcacatcccagctgattgttcaacttacatgcgtgcttgattaccgtccagtagcaccctaatgtgctcgtctgtgggttccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGGTGCCGGTGGCTTCATCGACCCCCAGTGGCTCCCATACGCCGAGATCATC

Basic information

species Physcomitrella patens
transcript PP1S214_86V6.1
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S214_86V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: GRMZM2G010884_T01 (Zea mays), 3'ss of exon 2
gtgagtaaatctgccactcagtgtcctacaggggattttccagcccatgcacatcccagctgattgttcaacttacatgcgtgcttgattaccgtccagtagcaccctaatgtgctcgtctgtgggttccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGGTGCCGGTGGCTTCATCGACCCCCAGTGGCTCCCATACGCCGAGATCATC
                      || |    |    ||  ||  |||  || || |  | ||  |     | |    ||     |   ||   |  |        ||  | |||    | |||   |     ||||||  |||||||||||||||| || || ||| |||||||   |||||| |||||  |||| ||||||||||| ||| |||||||  | || | |||| | |||
------------------gtacgtacctgcgctcgttgcccgccccgcgcgcagcaaacct--tctgctagcgacgatagaaaccctatgctcacctg------cctcattgttgctg-ctgcatgcatgcatgcagGCTGCCCGGCGACTATGGCTTCGACCCGCTGGGCCTCTCGGACCCGGAGGGCACCGGGGGCTTCATCGAGCCCAAGTGGCTGGCCTATGGCGAGGTGATC
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18324887|gb|BJ156882.1|BJ156882
EST:     AGGAACCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208387078|gb|DC941250.1|DC941250
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208356454|gb|DC914316.1|DC914316
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|67570569|gb|BJ943393.1|BJ943393
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|100384402|gb|BY987261.1|BY987261
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208366102|gb|DC935863.1|DC935863
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208353779|gb|DC906467.1|DC906467
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|100451650|gb|CJ974873.1|CJ974873
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208379083|gb|DC911608.1|DC911608
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|162238838|gb|FC417654.1|FC417654
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208383757|gb|DC928060.1|DC928060
EST:     AGGAGCCTGATCTTTGCCTNCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTNCCCGGCGANTATNGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208356509|gb|DC914343.1|DC914343
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208394075|gb|DC957156.1|DC957156
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208376054|gb|DC914451.1|DC914451
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208391314|gb|DC938204.1|DC938204
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|162230746|gb|FC406377.1|FC406377
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|18331980|gb|BJ163992.1|BJ163992
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|100380966|gb|BY986825.1|BY986825
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208359155|gb|DC934658.1|DC934658
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTAGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|162177246|gb|FC353403.1|FC353403
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|100382139|gb|BY969014.1|BY969014
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208394318|gb|DC904138.1|DC904138
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|100364816|gb|BY947922.1|BY947922
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|100391154|gb|BY953164.1|BY953164
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|162260201|gb|FC436336.1|FC436336
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208392440|gb|DC904272.1|DC904272
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208354951|gb|DC914215.1|DC914215
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|100444335|gb|BY982364.1|BY982364
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208376622|gb|DC932086.1|DC932086
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208390608|gb|DC937540.1|DC937540
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208357988|gb|DC938845.1|DC938845
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|67574712|gb|BJ947536.1|BJ947536
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208366871|gb|DC940185.1|DC940185
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208384387|gb|DC928138.1|DC928138
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|67570082|gb|BJ942906.1|BJ942906
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|67709956|gb|BJ965772.1|BJ965772
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|162166493|gb|FC343190.1|FC343190
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|100386408|gb|BY951204.1|BY951204
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|100449881|gb|CJ973983.1|CJ973983
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|162242145|gb|FC414484.1|FC414484
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208385182|gb|DC911400.1|DC911400
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|18368291|gb|BJ200376.1|BJ200376
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|100387610|gb|BY951610.1|BY951610
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208349762|gb|DC905886.1|DC905886
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208382428|gb|DC927962.1|DC927962
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|100447189|gb|CJ971488.1|CJ971488
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208400089|gb|DC904737.1|DC904737
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208384433|gb|DC928184.1|DC928184
EST:     AGGAGCNTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|18330531|gb|BJ162537.1|BJ162537
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|100416863|gb|BY993127.1|BY993127
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|162191197|gb|FC367875.1|FC367875
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208379018|gb|DC907767.1|DC907767
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208399296|gb|DC912483.1|DC912483
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208399058|gb|DC904467.1|DC904467
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208345229|gb|DC901517.1|DC901517
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|100390536|gb|BY952944.1|BY952944
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208380158|gb|DC927437.1|DC927437
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|67573660|gb|BJ946484.1|BJ946484
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208376009|gb|DC914434.1|DC914434
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208382203|gb|DC914836.1|DC914836
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|162228101|gb|FC404656.1|FC404656
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|162227561|gb|FC403503.1|FC403503
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208384451|gb|DC928202.1|DC928202
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208384323|gb|DC903390.1|DC903390
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|18370467|gb|BJ202069.1|BJ202069
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCC
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCC
EST: gi|18328340|gb|BJ160344.1|BJ160344
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|18358378|gb|BJ190437.1|BJ190437
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|162240907|gb|FC415186.1|FC415186
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|162244176|gb|FC420958.1|FC420958
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|100372941|gb|BY949359.1|BY949359
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|18362410|gb|BJ194480.1|BJ194480
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|18347125|gb|BJ179171.1|BJ179171
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGG
EST: gi|18370320|gb|BJ201922.1|BJ201922
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|67573316|gb|BJ946140.1|BJ946140
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|18330409|gb|BJ162415.1|BJ162415
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|162258536|gb|FC434751.1|FC434751
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208367308|gb|DC951254.1|DC951254
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|100356749|gb|BY965261.1|BY965261
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208371641|gb|DC932470.1|DC932470
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|18329214|gb|BJ161220.1|BJ161220
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208349970|gb|DC913678.1|DC913678
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|162270096|gb|FC446796.1|FC446796
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208378038|gb|DC914387.1|DC914387
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|100358149|gb|BY965497.1|BY965497
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
EST: gi|208383560|gb|DC928089.1|DC928089
EST:     AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCAC                         CTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG
genomic: AGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 142

GGTGGGAGCAAGAGGAGCCTGATCTTTGCCTCCAAGCAAAGCCTGTCTTACCTTGATGGCACgtgagtaaat ... tccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGGTGCCGGTGGCTTCATCGACCCCCAGTGGCTCCCATACGCCGAGATCATC




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gcttgattaccgtccagtagcaccctaatgtgctcgtctgtgggttccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGGTGCCGGTGGCTTCATCGACCCCCAGTGGCTCCCATACGCCGAGATCATC
                      ccctaat  putative branch site (score: 142)
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtgagtaaatctgccactcagtgtcctacaggggattttccagcccatgcacatcccagctgattgttcaacttacatgcgtgcttgattaccgtccagtagcaccctaatgtgctcgtctgtgggttccgatgcagCTTGCCCGGCGACTATGGGTTTGATCCGTTGGGCCTGATGGACCCCGAGGGTGCCGGTGGCTTCATCGACCCCCAGTGGCTCCCATACGCCGAGATCATC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGATCA