1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
...atgtgtgttaaacctataattaggagtgccccttgacaattactgtatctgtattataagttttttacggtggtaaggataagctgacgctcatggacagGGAGGGTGCCGAACCGGATTGGCCAAAGTCACGAGTGGCTATGATCTACCTGCAAG
species | Physcomitrella patens |
transcript | PP1S204_122V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GCTTGCACCCGGCGGCTGGACCTGGGCTTGCGGAGGAGTGCGCTGCTCTG GGAGGGTGCCGAACCGGATTGGCCAAAGTCACGAGTGGCTATGATCTACCTEST: gi|162184754|gb|FC361992.1|FC361992
genomic: GCTTGCACCCGGCGGCTGGACCTGGGCTTGCGGAGGAGTGCGCTGCTCTGgtaagctttt ... tcatggacagGGAGGGTGCCGAACCGGATTGGCCAAAGTCACGAGTGGCTATGATCTACCT
EST: GCTTGCACCCGGCGGCTGGACCTGGGCTTGCGGAGGAGTGCGCTGCTCTG GGAGGGTGCCGAACCGGATTGGCCAAAGTCACGAGTGGCTATGATCTACCTEST: gi|162171606|gb|FC347547.1|FC347547
genomic: GCTTGCACCCGGCGGCTGGACCTGGGCTTGCGGAGGAGTGCGCTGCTCTGgtaagctttt ... tcatggacagGGAGGGTGCCGAACCGGATTGGCCAAAGTCACGAGTGGCTATGATCTACCT
EST: GCTTGCACCCGGCGGCTGGACCTGGGCTTGCGGAGGAGTGCGCTGCTCTG GGAGGGTGCCGAACCGGATTGGCCAAAGTCACGAGTGGCTATGATCTACCT
genomic: GCTTGCACCCGGCGGCTGGACCTGGGCTTGCGGAGGAGTGCGCTGCTCTGgtaagctttt ... tcatggacagGGAGGGTGCCGAACCGGATTGGCCAAAGTCACGAGTGGCTATGATCTACCT
tatctgtattataagttttttacggtggtaaggataagctgacgctcatggacagGGAGGGTGCCGAACCGGATTGGCCAAAGTCACGAGTGGCTATGATCTACCTGCAAG
agctgac putative branch site (score: 1)
tattataagtttttta TA-rich tract