Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagttcaagcttttgcttccccaccttatcctatgctcgccgaatgcaaattgcaaatcacgtcagggatatgcttatgaatattgctctcagtattagttgtcaggctcatgtcggacgggctttgatctctgttttttttggtgcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTACCACACGCTCGTCATCCGAGCGCTACCTTTCAGGAAACGGGTGTAAAAAA

Basic information

species Physcomitrella patens
transcript PP1S1_535V6.2
intron # 3
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208362876|gb|DC950826.1|DC950826
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208378854|gb|DC927556.1|DC927556
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208362770|gb|DC950570.1|DC950570
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67725901|gb|BJ976160.1|BJ976160
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208390891|gb|DC945908.1|DC945908
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67723905|gb|BJ974164.1|BJ974164
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208367831|gb|DC954904.1|DC954904
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67724995|gb|BJ975254.1|BJ975254
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208365440|gb|DC950907.1|DC950907
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67727171|gb|BJ977430.1|BJ977430
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208385898|gb|DC956736.1|DC956736
EST:     TAGGTGCTGNTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208366648|gb|DC955668.1|DC955668
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208366386|gb|DC947582.1|DC947582
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208386449|gb|DC956825.1|DC956825
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208370840|gb|DC948293.1|DC948293
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67721250|gb|BJ971509.1|BJ971509
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208364091|gb|DC947251.1|DC947251
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208371894|gb|DC951712.1|DC951712
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67727892|gb|BJ978151.1|BJ978151
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208357453|gb|DC953777.1|DC953777
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208383135|gb|DC919582.1|DC919582
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67720444|gb|BJ970703.1|BJ970703
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208366982|gb|DC951469.1|DC951469
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67725945|gb|BJ976204.1|BJ976204
EST:     AACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: AACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208374548|gb|DC944990.1|DC944990
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67726850|gb|BJ977109.1|BJ977109
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208357274|gb|DC949904.1|DC949904
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208365834|gb|DC947744.1|DC947744
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67728035|gb|BJ978294.1|BJ978294
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208389517|gb|DC945783.1|DC945783
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208362125|gb|DC950532.1|DC950532
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208387239|gb|DC945538.1|DC945538
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208368152|gb|DC947712.1|DC947712
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208350991|gb|DC917722.1|DC917722
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208371696|gb|DC951612.1|DC951612
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67722357|gb|BJ972616.1|BJ972616
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208346610|gb|DC916876.1|DC916876
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208358833|gb|DC957633.1|DC957633
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208364066|gb|DC950386.1|DC950386
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208368686|gb|DC955171.1|DC955171
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67726330|gb|BJ976589.1|BJ976589
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208362845|gb|DC950795.1|DC950795
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208396180|gb|DC923974.1|DC923974
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67724709|gb|BJ974968.1|BJ974968
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208372764|gb|DC952651.1|DC952651
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208375088|gb|DC944841.1|DC944841
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208354277|gb|DC957455.1|DC957455
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67725679|gb|BJ975938.1|BJ975938
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67725725|gb|BJ975984.1|BJ975984
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208397911|gb|DC916666.1|DC916666
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208366268|gb|DC947526.1|DC947526
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67717428|gb|BJ967687.1|BJ967687
EST:     AACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: AACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208361558|gb|DC950288.1|DC950288
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67728067|gb|BJ978326.1|BJ978326
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208375096|gb|DC956450.1|DC956450
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67728050|gb|BJ978309.1|BJ978309
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67726637|gb|BJ976896.1|BJ976896
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67724895|gb|BJ975154.1|BJ975154
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208359407|gb|DC954246.1|DC954246
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|67724207|gb|BJ974466.1|BJ974466
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
EST: gi|208366487|gb|DC954823.1|DC954823
EST:     TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCAC                         TGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC
genomic: TAGGTGCTGCTGTTGTCTTTAACAAACAGAACAACGCTTGGGCCGATCACgtgagttcaa ... gcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTAC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgtcaggctcatgtcggacgggctttgatctctgttttttttggtgcttttgcagTGGATTTTTTGGATCGGTCCCATGCTTGGCGCGGCGCTCGCCGCAGCTTACCACACGCTCGTCATCCGAGCGCTACCTTTCAGGAAACGGGTGTAAAAAA
                      ctttgat  putative branch site (score: 5)
                                            tgctttt  putative PPT
                                tgtttttttt  TA-rich tract