1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...ctcttcattgtggcgaatgtaggctttagtttcttctcaactctgaaatttgacactgtttacatcggagtttttaacattaactttcaaaattgcgcagGAAAGGGTCAAAGACAGGTGCTTCCAGTCGGTGTGCAGGGTGTCAAGGGTCAGGTACGAAGGTCTCAATTCGCCAATTGGGCCCCAACATGATCCAGCAG
species | Physcomitrella patens |
transcript | PP1S17_208V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TCAAAGAAGCTCTCTTTGTCAAGGAATGTCATTTGCCAGAAGTGTAAAGG GAAAGGGTCAAAGACAGGTGCTTCCAGTCGGTGTGCAGGGTGTCAAGGGTC
genomic: TCAAAGAAGCTCTCTTTGTCAAGGAATGTCATTTGCCAGAAGTGTAAAGGgtaaggctga ... aattgcgcagGAAAGGGTCAAAGACAGGTGCTTCCAGTCGGTGTGCAGGGTGTCAAGGGTC
aaatttgacactgtttacatcggagtttttaacattaactttcaaaattgcgcagGAAAGGGTCAAAGACAGGTGCTTCCAGTCGGTGTGCAGGGTGTCAAGGGTCAGGTACGAAGGTCTCAATTCGCCAATTGGGCCCCAACATGATCCAGCAG
cattaac putative branch site (score: 10)
tttttaacattaactt TA-rich tract