Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tctgaaggaattttagtttgcgatcaaaaactatgcgcatcctcaaacaggatttcccctgagttagtttcatttctcattatctggtttgattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGATTAGAATTGCTTAATGGGTTGAGTGGGACCTTTTATATGCCAGTGTCGAC

Basic information

species Physcomitrella patens
transcript PP1S152_152V6.1
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S152_152V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: GLYMA03G42180.1 (Glycine max), 3'ss of exon 3
-------tctgaaggaattttagtttgcgatcaaaaactatgcgcatcctcaaacaggatttcccctgagttagtttcatttctcattatctggtttgattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGATTA--GAATTGCTTAATGGGTTGAGTGGGACCTTTTATATGCCAGTGTCGAC--
       ||||  | |||| | |||   | |   |   | |  | |||||       | |  |   |  ||   |   ||       |   || |   ||| |  |||| || ||| | |||||||||||||| || ||||||||| | |||||||||||  ||  | || ||||  |||  |      | |  |     |   |  |   
gtaaccctctggtgaaattgttgttcctgct---attgtttttgaatcctgccttgtggtagcttatatgtatctaatatggaaatctgcttgttgcaattctataggaagAACCGGAAGAAGAGAGTGATGATGATATGGGATTCGGCTTGTTTGATTAGGGACATTCTCAATGATTTGGTTAAATTTTGTGGTTCTTTACCTTTTAAGG

upper sequence: PP1S152_152V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: GLYMA03G42180.3 (Glycine max), 3'ss of exon 3
-------tctgaaggaattttagtttgcgatcaaaaactatgcgcatcctcaaacaggatttcccctgagttagtttcatttctcattatctggtttgattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGATTA--GAATTGCTTAATGGGTTGAGTGGGACCTTTTATATGCCAGTGTCGAC
       ||||  | |||| | |||   | |   |   | |  | |||||       | |  |   |  ||   |   ||       |   || |   ||| |  |||| || ||| | |||||||||||||| || ||||||||| | |||||||||||  ||  | || ||||  |||  |      | |  |     |   |    
gtaaccctctggtgaaattgttgttcctgct---attgtttttgaatcctgccttgtggtagcttatatgtatctaatatggaaatctgcttgttgcaattctatagGAAGAACCGGAAGAAGAGAGTGATGATGATATGGGATTCGGCTTGTTTGATTAGGGACATTCTCAATGATTTGGTTAAATTTTGTGGTTCTTTACCTTTT--

upper sequence: PP1S152_152V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: Vv02s0025g02780.t01 (Vitis vinifera), 3'ss of exon 3
tctgaaggaatt--ttagtttgcgatcaaaaactatgcgcat-cctcaaacaggatttcccctgagttagtttcatttctcattat--ctggtttgattt---------------tgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGATTAGAATTGCTTAATGGGTTGAGTGGGACCTTTTATATGCCAGTGTCGAC
   | ||  |||  ||   ||    |  |  | ||    |||   |  |  | | ||||   |   ||  |||  || |  | | |   ||||||| | |               | |||||||| || ||||||||||||||||| ||||||||||||||||||||||||||| |   | |    |  ||| | | |  ||  |  |    |  |  | 
gtaggagctattcctttaattttatttgagtaatacatacatgttttgattatggtttcatttttttttttttttttgcctaatgtgtttggtttgttctgggttgccaaaatactacagGAGGAACCAAAGGAAGAGAGTGATGAGGACATGGGATTCAGTTTGTTTGATTAGGAGCTCCTTTCAGTATGAATAGTATTTTGCAATTTTATGACTTCAT

upper sequence: PP1S152_152V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: Vv15s0048g02610.t01 (Vitis vinifera), 3'ss of exon 3
tctgaaggaattttagtttgcgatcaaaaactatgcgcatcctcaaacaggatttcccctgagttagtttcatttctcattatctggtttg---atttt------gcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGATTAGAATTGCTTAATGGGTTGAGTGGGACCTTTTATATGCCAGTGTCGAC---
    ||   |||    ||||  ||   ||| |    |     |  |      |      |  ||| ||||| | | ||  |   || |||    |||||      |||||| || || ||||||||||||||||| |||||||| || || |||||||||||| |    || ||   |||  | |   ||  | ||  || ||||  |    
--gtaattcattgggttttgttatttgaaatttgaagggcattggacttttttggtttttaggttggtttcttatttctctgattgatttatgtattttcttaatgcagGAAGAACCCAAGGAAGAGAGTGATGATGACATGGGCTTTAGCTTGTTTGATTAGGAGCTTTTGAT---TTGGTTTGTCGCTAGTTTAGTCCTGTGTTAAATCT

upper sequence: PP1S152_152V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: Vv16s0098g01010.t01 (Vitis vinifera), 3'ss of exon 2
tctgaaggaattttagt--ttgcgatcaaaaactatgcgcat-cctcaaacaggatttcccctgagttagtttcatttctcattatctggttt-gattttg---cagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGATTAGAA-TTGCTTAATGGGTTGAGTGGGACCTTTTATATGCCAGTGTCGAC
        | ||||  |  || |  | |  |  | |   |||   || ||    |||     |   ||  ||   || || ||||  || ||| || | ||   ||||| || || |||||||| ||||| ||||||||||||||||| |||||||| ||| |  | |||   |  || |||  ||  || |   |          | 
-------tatttttcatagttactgtgatgagtttttttcatatttctaatgacattgagtttttcttgtttgatttgcttattacttgtttttgaatgtgatacagGAAGAACCAAAGGAAGAAAGTGACGACGACATGGGATTCAGCTTGTTTGACTAGGAGCTCCTTTCGGCTTTCAGTATGATATTGTTCTTTTTGCAAATTA-

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162214781|gb|FC391852.1|FC391852
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|67716324|gb|BJ966584.1|BJ966584
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162274346|gb|FC450314.1|FC450314
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|67722728|gb|BJ972987.1|BJ972987
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162273071|gb|FC447765.1|FC447765
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|67722167|gb|BJ972426.1|BJ972426
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162267478|gb|FC444229.1|FC444229
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|67717378|gb|BJ967637.1|BJ967637
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|7648026|gb|AW739009.1|AW739009
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|18355607|gb|BJ187666.1|BJ187666
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162234300|gb|FC409838.1|FC409838
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|18369120|gb|BJ201205.1|BJ201205
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGANAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|67709626|gb|BJ965442.1|BJ965442
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162275906|gb|FC451467.1|FC451467
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162201887|gb|FC376885.1|FC376885
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|18370169|gb|BJ201771.1|BJ201771
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162237278|gb|FC413853.1|FC413853
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162218542|gb|FC395119.1|FC395119
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162278158|gb|FC454393.1|FC454393
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|18327778|gb|BJ159782.1|BJ159782
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|7147747|gb|AW509612.1|AW509612
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162271027|gb|FC446080.1|FC446080
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|67724838|gb|BJ975097.1|BJ975097
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|18334750|gb|BJ166767.1|BJ166767
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|19781597|gb|BQ039747.1|BQ039747
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|7583253|gb|AW699417.1|AW699417
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162190459|gb|FC365681.1|FC365681
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162218541|gb|FC395118.1|FC395118
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|22492450|gb|BU052373.1|BU052373
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCTTTTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|15729998|gb|BI741605.1|BI741605
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|67724425|gb|BJ974684.1|BJ974684
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|7047488|gb|AW477382.1|AW477382
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|19775970|gb|BQ039036.1|BQ039036
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|67723701|gb|BJ973960.1|BJ973960
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162199916|gb|FC376183.1|FC376183
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|67712713|gb|BJ966162.1|BJ966162
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|7147965|gb|AW509887.1|AW509887
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162236016|gb|FC412175.1|FC412175
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|208361091|gb|DC946710.1|DC946710
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162228236|gb|FC404952.1|FC404952
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|7067016|gb|AW496871.1|AW496871
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162244892|gb|FC423524.1|FC423524
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|208378939|gb|DC922785.1|DC922785
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162203722|gb|FC378597.1|FC378597
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|208356900|gb|DC922264.1|DC922264
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|67725939|gb|BJ976198.1|BJ976198
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|7047310|gb|AW477204.1|AW477204
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTATGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162263631|gb|FC440115.1|FC440115
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|37848382|gb|BJ606390.1|BJ606390
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|7584150|gb|AW700047.1|AW700047
EST:     CTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|7582844|gb|AW699061.1|AW699061
EST:     ATGAAGCTCCCCAAGTAGAGGAGAAGAAT                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: ATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|67720188|gb|BJ970447.1|BJ970447
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|37844608|gb|BJ602616.1|BJ602616
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162213489|gb|FC389361.1|FC389361
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|208347576|gb|DC912835.1|DC912835
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|67725894|gb|BJ976153.1|BJ976153
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162278458|gb|FC454544.1|FC454544
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162208792|gb|FC384928.1|FC384928
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162207894|gb|FC383600.1|FC383600
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162279408|gb|FC455524.1|FC455524
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|7647921|gb|AW738904.1|AW738904
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|18340240|gb|BJ172268.1|BJ172268
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162278457|gb|FC454543.1|FC454543
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162266922|gb|FC443023.1|FC443023
EST:     CACCTGCTTCTTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|208377669|gb|DC932205.1|DC932205
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162191539|gb|FC368465.1|FC368465
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|18338284|gb|BJ170308.1|BJ170308
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|67693806|gb|BJ954039.1|BJ954039
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162205858|gb|FC381096.1|FC381096
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162266923|gb|FC443024.1|FC443024
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|67717969|gb|BJ968228.1|BJ968228
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|208398151|gb|DC908380.1|DC908380
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|18367838|gb|BJ199921.1|BJ199921
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|37832549|gb|BJ590561.1|BJ590561
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|67726472|gb|BJ976731.1|BJ976731
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGTAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|18342585|gb|BJ174620.1|BJ174620
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|67717422|gb|BJ967681.1|BJ967681
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162206330|gb|FC382608.1|FC382608
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162240015|gb|FC418805.1|FC418805
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162263630|gb|FC440114.1|FC440114
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|18374068|gb|BJ205646.1|BJ205646
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGNATTCAGTTTGTTTGA
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGG-ATTCAGTTTGTTTGA
EST: gi|37850992|gb|BJ609000.1|BJ609000
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162217198|gb|FC392562.1|FC392562
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162222572|gb|FC398723.1|FC398723
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|208354434|gb|DC926611.1|DC926611
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162217197|gb|FC392561.1|FC392561
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|37821730|gb|BJ579796.1|BJ579796
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162206354|gb|FC382632.1|FC382632
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162206512|gb|FC382881.1|FC382881
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
EST: gi|162275907|gb|FC451468.1|FC451468
EST:     CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAG                         GAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT
genomic: CACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGAT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 93

GTGGTGGTGCTGCCGTCGCTGTGAGCGCTGCACCTGCTTCCTCGGCTGCCGATGAAGCTCCCCAAGTAGAGGAGAAGAAGgtaatgatac ... gattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGATTAGAATTGCTTAATGGGTTGAGTGGGACCTTTTATATGCCAGTGTCGAC




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aacaggatttcccctgagttagtttcatttctcattatctggtttgattttgcagGAGGAGCCGAAGGAAGAGAGTGATGACGACATGGGATTCAGTTTGTTTGATTAGAATTGCTTAATGGGTTGAGTGGGACCTTTTATATGCCAGTGTCGAC
                                         gtttgat  putative branch site (score: 93)
                                          tttgatttt  TA-rich tract