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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...cagcgcagcaattacattttatttaggtacacgtagtcctggtcctctgatttacttagtgaactgatcaagggaatctgctaatgttgatttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC

Basic information

species Physcomitrella patens
transcript PP1S114_48V6.1
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S114_48V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: LOC_Os03g11440.1 (Oryza sativa), 3'ss of exon 3
cagcgcagcaattacattttatttaggtacacgtagtcctggtcctctgatttactta-gtgaactgatcaagggaatctgctaatgttgatttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC
                       |  | |||   |    || || |||   ||  | |  |   ||  ||||    |  |    |  |   | ||| | ||||| || ||||||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||| ||||| |||||  | ||||| ||  |  | 
----------------------gtgagcacattgaactttgttcttctctattgttgacattttctattcaacttgacttatggaaatctttctct-gtagTGAGAATATCATCTGGAAGGCATTTAGCCCCACAACTATCAACAGTGGCCGTGGTGCTGAGTTCGAGGGGGCTGTCATTGCATTGTTCCATCTGTTGATT

upper sequence: PP1S114_48V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: LOC_Os09g17840.1 (Oryza sativa), 3'ss of exon 2
cagcgcagcaattacattttatttaggtacacgtagtcctggtcctctgatttacttagtgaactgatcaagggaatctgctaatgttgatttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC
       | ||  |   |  | ||       | |  || || |  | |||  |  |     || | | |     |   || | |  ||| | |  | |||||| || |||||||||||||| |||||||| || || ||||||||||| ||||| ||||| || || ||                               
-------gtaagcatcctaaactt-------ctttctcttgctgatgtgacattttgtcgcaatttagCTTATTA--TTGGTGAACTTGCTGTTGCACAGTGAGAATATCATCTGGAAGGCGTTTAGCCCCACAACCATCAACAGTGGGCGTGGTGCTGAATTTGAAGGA------------------------------

upper sequence: PP1S114_48V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: LOC_Os09g17830.1 (Oryza sativa), 3'ss of exon 2
--cagcgcagcaattacattttatttaggtacacgtagtcctggtcctctgatttacttagtgaactgatcaagggaatctgctaatgttgatttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC
   |||     || |   |||   |||  | |     |   ||    | || |  | ||    | || || |        || | |  ||| | |  | |||||| || |||||||||||||| |||||||| || || ||||||||||| ||||| ||||| || || ||                               
gtaagcatcttaaatttctttatcttacattcttactgatgtgacattttgttacaattt---agCTTATTA-------TTGGTGAACTTGCTGTTGCACAGTGAGAATATCATCTGGAAGGCGTTTAGCCCCACAACCATCAACAGTGGGCGTGGTGCTGAATTTGAAGGA------------------------------

upper sequence: PP1S114_48V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: GRMZM2G130987_T02 (Zea mays), 3'ss of exon 3
cagcgcagcaattacattttatttaggtacac-gtagtcctggtcctctgatttacttagtgaactgatcaagggaatctgctaat---gttgatttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC
       | ||  |  ||  |||||         | |   | |   |  |||| |  || ||  ||| || |   | |||  ||||     || ||||  | ||||| || ||||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| || ||||| ||||| || ||||| ||  |  | 
-------gtaagcatgttggatttaatccttttattgatgttgatattagattgatgtaatgttctgttccacttagtcttataataagactgctttcatgtagTGAGAATATCATCTGGAAGGCATTTAGCCCCACAACCATCAACAGTGGTCGTGGCGCTGAATTCGAAGGGGCTGTCATTGCACTGTTCCATCTGTTGATT

upper sequence: PP1S114_48V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: GRMZM2G073498_T02 (Zea mays), 3'ss of exon 2
cagcgcagcaattacattttatttaggtacacgtagtcctggtcctctgatttacttagtgaactg----atcaagggaatctgctaatgttgatttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC
                       || | |  | | | | |  |||| | ||| |  |  ||  |||    |   |  |  | |  |||   |  ||||  | || || || ||||||||||||||||||||||| || || ||||||||||||||||| ||||| || || || ||||| ||||| || || || ||  |  | 
----------------------gtaagcat-cttggacttaatccttttattgatgtgctgttctgttgcacttaaagcttataataagaattctttcatgtagCGAGAATATCATCTGGAAGGCATTTAGCCCCACAACCATCAACAGTGGTCGTGGTGCTGAATTTGAAGGGGCTGTCATTGCACTGTTTCATCTGTTGATT

upper sequence: PP1S114_48V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: GRMZM2G307252_T02 (Zea mays), 3'ss of exon 2
cagcgcagcaattacattttatttaggtacacgtagtcctggtcctctgatttacttagtgaactg-atcaagggaatctgctaatgttgatttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC
  | |   || |||      |   |   |  |           | ||| ||| | |   |   ||| ||    ||  |  | |||  |    | |  | ||||| || |||||||||||||| ||||||||||| || ||||||||||| ||||| ||||| || || || || || |||||  | ||||| ||  |  | 
-tgtggcacatttagccacaaaccaaacaggccctaaatgccacatctcattgattagctattctgtatgtgcggcttacggtaaactcatgtccatgtagTGAGAATATCATCTGGAAGGCGTTTAGCCCAACAACCATCAACAGTGGGCGTGGTGCTGAATTTGAAGGGGCAGTCATTGCATTGTTCCATCTATTGATT

upper sequence: PP1S114_48V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: GLYMA12G17950.1 (Glycine max), 3'ss of exon 3
----------cagcgcagcaattacattttatttaggtacacgtagtcctggtcctctgatttacttagtgaactg-----------atcaagggaatctgctaa---tgttgatttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC
            |   |  | ||||| ||||||     |       |     || |   |  || | |   |||||           |||||     | |   ||   | |   | | | |||||||||||||||| ||||| ||||||||||| || || || |||||||| ||||||||||| || ||||| ||||| |||||||| |||||  |  |  | 
gtaagttttcttgttaataacttacaatttattccatcattgagcttgtgtctcatagaaactattgaacaaactgtatggtcttttatcaaaaacttgtatgaattctctcattatgttgcagTGAAAACATCATATGGAAAGCATTTAGCCCCACCACCATTAACAGTGGACGTGGAGCTGAATTTGAGGGTGCTGTCATTGCTCTATTCCATTTGTTGATA

upper sequence: PP1S114_48V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: GLYMA12G35990.1 (Glycine max), 3'ss of exon 3
-------------------------------------cagcgcagcaattacattttatttaggtacacgtagtcctggtcctctgatttacttagtgaactgatcaagggaatctgctaatgttgatttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC
                                           |    |    || | ||   | |   |    || |    | | |   | |||   ||    | || |||||   ||  |||   |||    |||||||||||| || |||||||||||||| || || ||||| |||||||| ||||||||||| || || || |||||||||||||| |||||  | ||  | 
gtaaatttctaccctaacgatatatttcctgcttgtaatctataatgttcttgttgtcttctagcaactgctaaccagaatgtttaacc-atttatcaaatacttaaaaggaattccct--tgtcattttt---cagTGAAAACATTATATGGAAGGCATTTAGTCCCACCACTATTAACAGTGGACGTGGAGCTGAATTTGAAGGTGCTGTTATTGCTCTGTTCCATTTGCTGATA

upper sequence: PP1S114_48V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: GLYMA13G34370.1 (Glycine max), 3'ss of exon 3
-----------------------------------------cagcgcagcaattacattttatttaggtacacgtagtcctggtcctctgatttacttagtgaactgatcaagggaatctgctaatgttgatttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC
                                          |    |    |    || | ||   | |   |    || ||   | | |   | |||   ||    | || |||||   ||  | | | |||    |||||||||||| || |||||||||||||| ||||| || || |||||||| ||||||||||| || || || |||||||||||||| |||||  |  |  | 
gtaaatttctacttttccctgatgagatatttccagcttttaattataatgttcttgttgtcttctagcaactgctaaccaggatatttaacc-atttatctaatacttaaatggaattccct--tttcgttttt---cagTGAAAACATTATATGGAAGGCATTTAGTCCAACCACCATTAACAGTGGGCGTGGAGCTGAATTTGAAGGTGCTGTTATTGCTCTGTTCCATTTGTTGATA

upper sequence: PP1S114_48V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: GLYMA06G32680.1 (Glycine max), 3'ss of exon 3
--------------cagcgcagcaattacat--tttatttaggtac---acgta-gtcctggtcctctgatttacttagtgaactg------atcaagggaatctgctaatgtt--gatttc-tcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC
              |     |   |||  ||  ||||||   | |     | |  |||      |    |||  |  |||| |  |      || ||     | |   |||  |  |||| | | |||||||||||||||| ||||| |||||||| || || || || |||||||| ||||||||||| || || || ||||| |||||||| |||||  |  |  | 
gtaagttttattgtcccttaatttattgtataatttattccagcatcgagcttgtgtctcatagcaactattagcaaagtgtatggtcttttataaaaaacttatatgaattctctgattacattgcagTGAAAACATCATATGGAAAGCATTTAGTCCCACCACCATTAACAGTGGACGTGGAGCTGAATTTGAAGGTGCTGTCATTGCTCTATTCCATTTGTTGATA

upper sequence: PP1S114_48V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: AT1G78720.1 (Arabidopsis thaliana), 3'ss of exon 2
cagcgcagcaattacattttatttaggtacacgtagtcctggtcctctgatttacttagtgaactgatcaagggaatctgctaatgttgatttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC
                |    |||| |||| |  |   || |   |||   |||    || |   |       ||   |  |   |||  ||| ||  ||||||| ||| || ||||| ||||| || || || || ||||||||||| ||||||||| | || || || |||||||||||||| |||||||||||  | 
---------------gtgagttttaagtactccaacgtctagctttctcggttaaaccgttatgcgcatttcagatgttaatggagtttcttt-tcttagTGAAAGCATTATATGGAAAGCATTCAGTCCTACAACCATCAACAGTGGGCGTGGAGCTCAATTTGAAGGAGCTGTTATTGCTCTTTTCCACCTTCTCATT

upper sequence: PP1S114_48V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: Vv00s1338g00020.t01 (Vitis vinifera), 3'ss of exon 2
------------------------------------------------------------------------------cagcgcagcaattacattttatttaggtacacgtagtcctggtcctc---tgatttacttagtgaactgatcaagggaatctgctaatg--ttgattt------ctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC
                                                                                |   ||||   |     | | | |  |   || | ||   |       |||   | | | |  ||||   |   |    ||||||||  ||| |||       | ||||||||||||||||||||||||| |||||||| || ||||| || ||||||||||||||||| || || || |||||||||||||||||||| || ||  | 
gttagcatctggttctttttctgggattttttttaattaatttatgattttgaacatggaatatttgaagaagctttatcgtctagcagccag----tgtctggtgaatggtgggcccattttctgggtgaaccattaactctactgtcaagtagtgattgctaatgaattgttttgatcaattggcagTGAAAACATCATCTGGAAGGCTTTTAGCCCCACCACTATTAATAGTGGTCGTGGAGCTGAATTTGAAGGTGCTGTTATTGCTCTCTTCCATCTGCTAATA

upper sequence: PP1S114_48V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: Vv00s2574g00010.t01 (Vitis vinifera), 3'ss of exon 2
------------------------------------------------------------------------------cagcgcagcaattacattttatttaggtacacgtagtcctggtcctc---tgatttacttagtgaactgatcaagggaatctgctaatg--ttgattt------ctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC
                                                                                |   ||||   |     | | | |  |   || | ||   |       ||    | | | |  ||||   |   |    ||||||||  ||| |||       | ||||||||||||||||||||||||| |||||||| || ||||| || ||||||||||||||||| || || || |||||||||||||||||||| || ||  | 
gttagcatctgcttctttttctgggattttttttaattaatttatgattttgaacatggaatatttgaagaagctttattgtctagcagccag----tgtctggtgaatggtgggcccattttctgggtggaccattaactctactgtcaagtagtgattgctaatgaattgttttgatcaattggcagTGAAAACATCATCTGGAAGGCTTTTAGCCCCACCACTATTAATAGTGGTCGTGGAGCTGAATTTGAAGGTGCTGTTATTGCTCTCTTCCATCTGCTAATA

upper sequence: PP1S114_48V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: Vv19s0014g01020.t01 (Vitis vinifera), 3'ss of exon 3
-----------------------------------------------------------------------------cagcgcagcaatta-cattttatttaggtacacgtagtcctggtcctctgatttacttagtgaactgatcaagggaatctgctaatgttgatttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC
                                                                             |     ||||   | | | |  |  | ||   |  | | ||||       ||| |||       |  ||   |  ||| || |    |  |||    ||||||||||||||||||||||||| |||||||| || ||||| || || |||||||||||||| || || || || ||||||||||||||||| || ||  | 
gtgagcatctggttctttttctgggattttttttattaatttatcattttgaacatggaatatttgaagaagctttactatctagcagccagcgtctggtgaatgtggtctcatttctgggttgaccattaactctactgtcaaatagtgacaat-tgttttgatcaattg---gcagTGAAAACATCATCTGGAAGGCTTTTAGCCCCACCACTATTAATAGCGGTCGTGGAGCTGAATTTGAAGGTGCCGTTATTGCTCTCTTCCATCTGCTAATA

upper sequence: PP1S114_48V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: Vv10s0003g00710.t01 (Vitis vinifera), 3'ss of exon 1
--cagcgcagcaattacattttattta--ggtacacgtagtcctggtcctctgatttacttagtgaactgatcaagggaatctgctaatgttgatttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC
  |     ||||   |   | || | |  |||   |  | | ||||       ||| |||     | |  ||   |  ||| || |  | |  |||    | ||||||||||||||||||||||| |||||||| |||||||| || || | || ||||| ||| || || || | |||||||||||||||| | || ||    
tactatctagcagccagtgtctagtgaatggtggtctcatttctgggttgaccattaactctactatcaaatagtgataat-tgtttttatcaattg---gtagTGAAAACATCATCTGGAAGGCTTTTAGCCCCACTACTATTAATAGCGATCATGGAGTTGAATTTGAAGGTGTTGTTATTGCTCTCTTCTATCTGCTAACA

upper sequence: PP1S114_48V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: EFJ11193 (Selaginella moellendorffii), 3'ss of exon 2
cagcgcagcaattacattttatttaggtacacgtagtcctggtcctctgatttacttagtgaactgatcaagggaatctgctaatgttgatttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC
                                   ||    |    ||  ||   ||   |  |||||        | | ||| |||  || | |  |||||| ||||||||||||||||| ||||| || ||||| ||||||||||| |||||||||||||||||||| ||| | |||||||| ||||||||  |  ||
-----------------------------------gtgagagaaacctttttcttttcaagctctgatt-------ttttctattgt--atctgtgacagTGAGAACATCATCTGGAAGGCGTTTAGTCCGACTACCATCAACAGTGGCCGTGGAGCTGAGTTCGAGGGAGCTATCATTGCTCTGTTCCACCTCTTGATC

upper sequence: PP1S114_48V6.1 (Physcomitrella patens), 3'ss of exon 3
lower sequence: EFJ15673 (Selaginella moellendorffii), 3'ss of exon 2
cagcgcagcaattacattttatttaggtacacgtagtcctggtcctctgatttacttagtgaactgatcaagggaatctgctaatgttgatttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC
                                ||         | | |  ||| |    |   ||||| |        | ||| |||     | |  |||||| | ||||||||||||||| ||||| || ||||| ||||||||||| |||||||||||||| ||||| ||| | |||||||||||||||||  |  ||
--------------------------------gtgagagaaaccttttccttttccagct---ctgatta-------tttctattgtga--ctgtgacagTGAGACCATCATCTGGAAGGCGTTTAGTCCGACTACCATCAACAGTGGCCGTGGAGCTGAGTTTGAGGGAGCTATCATTGCTCTCTTCCACCTCTTGATC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|100362213|gb|BY947246.1|BY947246
EST:     GTTATGGGCTTGGGTCAGGAATTTCTCTNGT-CATCGCCACGAATATCTG                         TGAAAACATCATCTGGGAGGCATTTAGCCCAACTACTATCAAC
genomic: GTTATGGGCTTGGGTCAGGAATTTCTCT-GTTCATCGCCACGAATATCTGgtaagctatt ... tttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAAC
EST: gi|100364799|gb|BY947914.1|BY947914
EST:     TTATGGGCTTGGGTCAGGAATTTCTCTNGT-CATCNGC-ACGAATATCTG                         TGAAAACATCATCTGG
genomic: TTATGGGCTTGGGTCAGGAATTTCTCT-GTTCATC-GCCACGAATATCTGgtaagctatt ... tttctcgcagTGAAAACATCATCTGG
EST: gi|162185703|gb|FC361557.1|FC361557
EST:     GGTTATGGGCTTGGGTCAGGAATTTCTCTGTTCATCGCCACGAATATCTG                         TGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCG
genomic: GGTTATGGGCTTGGGTCAGGAATTTCTCTGTTCATCGCCACGAATATCTGgtaagctatt ... tttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCG
EST: gi|162179032|gb|FC356433.1|FC356433
EST:     GGTTATGGGCTTGGGTCAGGAATTTCTCTGTTCATCGCCACGAATATCTG                         TGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCG
genomic: GGTTATGGGCTTGGGTCAGGAATTTCTCTGTTCATCGCCACGAATATCTGgtaagctatt ... tttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCG
EST: gi|162166591|gb|FC343483.1|FC343483
EST:     GGTTATGGGCTTGGGTCAGGAATTTCTCTGTTCATCGCCACGAATATCTG                         TGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCG
genomic: GGTTATGGGCTTGGGTCAGGAATTTCTCTGTTCATCGCCACGAATATCTGgtaagctatt ... tttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tctgatttacttagtgaactgatcaagggaatctgctaatgttgatttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC
                                             tttctcgc  CT-rich tract
     tttactta  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
cagcgcagcaattacattttatttaggtacacgtagtcctggtcctctgatttacttagtgaactgatcaagggaatctgctaatgttgatttctcgcagTGAAAACATCATCTGGAAGGCATTTAGCCCAACTACTATCAACAGTGGTCGTGGAGCTGAGTTCGAGGGCGCTGTTATTGCTCTCTTCCACCTTCTTTTC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT