1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...aaaattgttttttttgttttgttttgttttgttttttgtttttttggataccaatgatttggtcatgactgatttgtgttgggttttttttggctcgcagGGTGCTAACAGCGTGAAG
species | Physcomitrella patens |
transcript | PP1S110_13V6.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CTCTTTTATGGATCGGTGTGGGAGTGGGTCTTTCAGCACTATTCTCTTTT GGTGCTAACAGCGTGAAGEST: gi|100451985|gb|CJ975042.1|CJ975042
genomic: CTCTTTTATGGATCGGTGTGGGAGTGGGTCTTTCAGCACTATTCTCTTTTgtgagtattg ... tggctcgcagGGTGCTAACAGCGTGAAG
EST: CTCTTTTATGGATCGGTGTGGGAGTGGGTCTTTCAGCACTATTCTCTTTT GGTGCTAACAGCGTGAAGEST: gi|208352398|gb|DC906181.1|DC906181
genomic: CTCTTTTATGGATCGGTGTGGGAGTGGGTCTTTCAGCACTATTCTCTTTTgtgagtattg ... tggctcgcagGGTGCTAACAGCGTGAAG
EST: CTCTTTTATGGATCGGTGTGGGAGTGGGTCTTTCAGCACTATTCTCTTTT GGTGCTAACAGCGTGAAGEST: gi|18372257|gb|BJ203859.1|BJ203859
genomic: CTCTTTTATGGATCGGTGTGGGAGTGGGTCTTTCAGCACTATTCTCTTTTgtgagtattg ... tggctcgcagGGTGCTAACAGCGTGAAG
EST: CTTTTATGGATCGGTGTGGGAAGTGGGGTCTTTCAGCACTATTCTCTTTT GGTGCTAACAGCGTGAAEST: gi|100429860|gb|BY978125.1|BY978125
genomic: CTTTTATGGATCGGTGTGGGA-GTGGG-TCTTTCAGCACTATTCTCTTTTgtgagtattg ... tggctcgcagGGTGCTAACAGCGTGAA
EST: CTCTTTTATGGATCGGTGTGGGAGTGGGTCTTTCAGCACTATTCTCTTTT GGTGCTAACAGCGTGAAGEST: gi|100440859|gb|BY962347.1|BY962347
genomic: CTCTTTTATGGATCGGTGTGGGAGTGGGTCTTTCAGCACTATTCTCTTTTgtgagtattg ... tggctcgcagGGTGCTAACAGCGTGAAG
EST: CTCTTTTATGGATCGGTGTGGGAGTGGGTCTTTCAGCACTATTCTCTTTT GGTGCTAACAGCGTGAAGEST: gi|100442213|gb|BY963106.1|BY963106
genomic: CTCTTTTATGGATCGGTGTGGGAGTGGGTCTTTCAGCACTATTCTCTTTTgtgagtattg ... tggctcgcagGGTGCTAACAGCGTGAAG
EST: CTCTTTTATGGATCGGTGTGGGAGTGGGTCTTTCAGCACTATTCTCTTTT GGTGCTAACAGCGTGAAGEST: gi|208357241|gb|DC910652.1|DC910652
genomic: CTCTTTTATGGATCGGTGTGGGAGTGGGTCTTTCAGCACTATTCTCTTTTgtgagtattg ... tggctcgcagGGTGCTAACAGCGTGAAG
EST: CTCTTTTATGGATCGGTGTGGGAGTGGGTCTTTCAGCACTATTCTCTTTT GGTGCTAACAGCGTGAAGEST: gi|162176403|gb|FC353588.1|FC353588
genomic: CTCTTTTATGGATCGGTGTGGGAGTGGGTCTTTCAGCACTATTCTCTTTTgtgagtattg ... tggctcgcagGGTGCTAACAGCGTGAAG
EST: CTCTTTTATGGATCGGTGTGGGAGTGGGTCTTTCAGCACTATTCTCTTTT GGTGCTAACAGCGTGAAGEST: gi|162184458|gb|FC359204.1|FC359204
genomic: CTCTTTTATGGATCGGTGTGGGAGTGGGTCTTTCAGCACTATTCTCTTTTgtgagtattg ... tggctcgcagGGTGCTAACAGCGTGAAG
EST: CTCTTTTATGGATCGGTGTGGGAGTGGGTCTTTCAGCACTATTCTCTTTT GGTGCTAACAGCGTGAAG
genomic: CTCTTTTATGGATCGGTGTGGGAGTGGGTCTTTCAGCACTATTCTCTTTTgtgagtattg ... tggctcgcagGGTGCTAACAGCGTGAAG
ggataccaatgatttggtcatgactgatttgtgttgggttttttttggctcgcagGGTGCTAACAGCGTGAAG
gactgat putative branch site (score: 4)
tttttttt putative PPT
tttttttt TA-rich tract