1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' |
...atttatattttatttggtaaaatttaagggcaacttgatgaggaatgctaagtgttgtaggtatcgatgttggtttgacctctgaagtatgggattacagGTATGCTTGCAGAAGTCACGGCGGTCCTAGTTGCAGCAGGCATTCGAATAAGGGCATGTTCT
species | Physcomitrella patens |
transcript | PP1S195_4V6.1 |
intron # | 21 |
splice site | 3' |
intron type | U2 |
EST: TGAGGGTGGCTCTATTCAATGGTTCAGCGTTTGCTGTCATGACCGAAACA GTATGCTTGCAGAAGTCACGGCGGTCCTAGTTGCAGCAGGCATTCGAATAAEST: gi|162258720|gb|FC434519.1|FC434519
genomic: TGAGGGTGGCTCTATTCAATGGTTCAGCGTTTGCTGTCATGACCGAAACAgtaaaatctt ... gggattacagGTATGCTTGCAGAAGTCACGGCGGTCCTAGTTGCAGCAGGCATTCGAATAA
EST: TGAGGGTGGCTCTATTCAATGGTTCAGCGTTTGCTGTCATGACCGAAACA GTATGCTTGCAGAAGTCACGGCGGTCCTAGTTGCAGCAGGCATTCGAATAAEST: gi|162180730|gb|FC357815.1|FC357815
genomic: TGAGGGTGGCTCTATTCAATGGTTCAGCGTTTGCTGTCATGACCGAAACAgtaaaatctt ... gggattacagGTATGCTTGCAGAAGTCACGGCGGTCCTAGTTGCAGCAGGCATTCGAATAA
EST: TGAGGGTGGCTCTATTCAATGGTTCAGCGTTTGCTGTCATGACCGAAACA GTATGCTTGCAGAAGTCACGGCGGTCCTAGTTGCAGCAGGCATTCGAATAAEST: gi|162227173|gb|FC402816.1|FC402816
genomic: TGAGGGTGGCTCTATTCAATGGTTCAGCGTTTGCTGTCATGACCGAAACAgtaaaatctt ... gggattacagGTATGCTTGCAGAAGTCACGGCGGTCCTAGTTGCAGCAGGCATTCGAATAA
EST: TGAGGGTGGCTCTATTCAATGGTTCAGCGTTTGCTGTCATGACCGAAACA GTATGCTTGCAGAAGTCACGGCGGTCCTAGTTGCAGCAGGCATTCGAATAAEST: gi|162226809|gb|FC402815.1|FC402815
genomic: TGAGGGTGGCTCTATTCAATGGTTCAGCGTTTGCTGTCATGACCGAAACAgtaaaatctt ... gggattacagGTATGCTTGCAGAAGTCACGGCGGTCCTAGTTGCAGCAGGCATTCGAATAA
EST: TGAGGGTGGCTCTATTCAATGGTTCAGCGTTTGCTGTCATGACCGAAACA GTATGCTTGCAGAAGTCACGGCGGTCCTAGTTGCAGCAGGCATTCGAATAA
genomic: TGAGGGTGGCTCTATTCAATGGTTCAGCGTTTGCTGTCATGACCGAAACAgtaaaatctt ... gggattacagGTATGCTTGCAGAAGTCACGGCGGTCCTAGTTGCAGCAGGCATTCGAATAA
tgctaagtgttgtaggtatcgatgttggtttgacctctgaagtatgggattacagGTATGCTTGCAGAAGTCACGGCGGTCCTAGTTGCAGCAGGCATTCGAATAAGGGCATGTTCT
gtttgac putative branch site (score: 18)