1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' |
...accatcttgtcgtgatgaaatgtcgcaattaattttactcctgatcttaaaaaacttcttaatggagtaaagggatgaatttaactggatattttcacagGGCTCGGAAGCAAGATAAACTACGATATAGATACCCGCGAGGGGAGTCTTATTTGGATGTCATACAAAG
species | Physcomitrella patens |
transcript | PP1S242_66V6.1 |
intron # | 20 |
splice site | 3' |
intron type | U2 |
EST: GATGGTATGACATATCTAGAAGTCAAAGAAACCATGCCTGAAGACTACTT GGCTCGGAAGCAAGATAAACTACGATATAGATACCCGCGAGGGGAGTCTTAEST: gi|162256997|gb|FC432736.1|FC432736
genomic: GATGGTATGACATATCTAGAAGTCAAAGAAACCATGCCTGAAGACTACTTgtaagtaatt ... attttcacagGGCTCGGAAGCAAGATAAACTACGATATAGATACCCGCGAGGGGAGTCTTA
EST: GATGGTATGACATATCTAGAAGTCAAAGAAACCATGCCTGAAGACTACTT GGCTCGGAAGCAAGATAAACTACGATATAGATACCCGCGAGGGGAGTCTTAEST: gi|162230831|gb|FC406670.1|FC406670
genomic: GATGGTATGACATATCTAGAAGTCAAAGAAACCATGCCTGAAGACTACTTgtaagtaatt ... attttcacagGGCTCGGAAGCAAGATAAACTACGATATAGATACCCGCGAGGGGAGTCTTA
EST: GATGGTATGACATATCTAGAAGTCAAAGAAACCATGCCTGAAGACTACTT GGCTCGGAAGCAAGATAAACTACGATATAGATACCCGCGAGGGGAGTCTTAEST: gi|162230830|gb|FC406669.1|FC406669
genomic: GATGGTATGACATATCTAGAAGTCAAAGAAACCATGCCTGAAGACTACTTgtaagtaatt ... attttcacagGGCTCGGAAGCAAGATAAACTACGATATAGATACCCGCGAGGGGAGTCTTA
EST: GATGGTATGACATATCTAGAAGTCAAAGAAACCATGCCTGAAGACTACTT GGCTCGGAAGCAAGATAAACTACGATATAGATACCCGCGAGGGGAGTCTTAEST: gi|67693913|gb|BJ954146.1|BJ954146
genomic: GATGGTATGACATATCTAGAAGTCAAAGAAACCATGCCTGAAGACTACTTgtaagtaatt ... attttcacagGGCTCGGAAGCAAGATAAACTACGATATAGATACCCGCGAGGGGAGTCTTA
EST: GATGGTATGACATATCTAGAAGTCAAAGAAACCATGCCTGAAGACTACTT GGCTCGGAAGCAAGATAAACTACGATATAGATACCCGCGAGGGGAGTCTTA
genomic: GATGGTATGACATATCTAGAAGTCAAAGAAACCATGCCTGAAGACTACTTgtaagtaatt ... attttcacagGGCTCGGAAGCAAGATAAACTACGATATAGATACCCGCGAGGGGAGTCTTA
cttaaaaaacttcttaatggagtaaagggatgaatttaactggatattttcacagGGCTCGGAAGCAAGATAAACTACGATATAGATACCCGCGAGGGGAGTCTTATTTGGATGTCATACAAAG
atttaac putative branch site (score: 1)
tattttc putative PPT
atgaatttaa TA-rich tract