1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...gggtcttttatttttgatttgttcatttagttatttgctctttccttctacatacagtaacaaaaagaattgttcacattgtggcattgtacgatgacagCGTAAGGAATTGCTGAAACAAAAAGACATCCTAGAATCTCGAAAGAAGTTGTTGCAAGGGGATATCGCTAACCGACGGAAGTTCCTCGGAACTCTTGCTT
species | Physcomitrella patens |
transcript | PP1S97_116V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: ATGACTCTCATAAACTTATGATACAGCGTCTAAAATTCGAGCTCTATCAG CGTAAGGAATTGCTGAAACAAAAAGACATCCTAGAATCTCGAAAGAAGTTG
genomic: ATGACTCTCATAAACTTATGATACAGCGTCTAAAATTCGAGCTCTATCAGgtgattgtca ... acgatgacagCGTAAGGAATTGCTGAAACAAAAAGACATCCTAGAATCTCGAAAGAAGTTG
ttctacatacagtaacaaaaagaattgttcacattgtggcattgtacgatgacagCGTAAGGAATTGCTGAAACAAAAAGACATCCTAGAATCTCGAAAGAAGTTGTTGCAAGGGGATATCGCTAACCGACGGAAGTTCCTCGGAACTCTTGCTT
cagtaac putative branch site (score: 1)
taacaaaaagaatt TA-rich tract