1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...aatcgtactggggaggatgaggtgtggacgtctttgactaccgtaagtgttaatcttctgttcgcgtgctattactgactagttaagtcgggatcaatagGTATGGTATTACTCGGGTACTGGAAGGTGGAGACCTCTTGGAGAAGGCGGCAGCAAACGTATCGATAGTGCGGGGCAGTTTGTCCGAAGCTAGGGCTAAG
species | Physcomitrella patens |
transcript | PP1S83_72V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: AAGATGTTTGGGTTTGACAAATGGCAACGAGGGGCTGACCCATCGAATGG GTATGGTATTACTCGGGTACTGGAAEST: gi|18361311|gb|BJ193377.1|BJ193377
genomic: AAGATGTTTGGGTTTGACAAATGGCAACGAGGGGCTGACCCATCGAATGGgtcaggattt ... ggatcaatagGTATGGTATTACTCGGGTACTGGAA
EST: AAGATGTTTGGGTTTGACAAATGGCAACGAGGGGCTGACCCATCGAATGG GTATGGTATTACTCGGGTACTGGAAGGTGGAGACCTCTTGGAGAAGGCGGC
genomic: AAGATGTTTGGGTTTGACAAATGGCAACGAGGGGCTGACCCATCGAATGGgtcaggattt ... ggatcaatagGTATGGTATTACTCGGGTACTGGAAGGTGGAGACCTCTTGGAGAAGGCGGC
agtgttaatcttctgttcgcgtgctattactgactagttaagtcgggatcaatagGTATGGTATTACTCGGGTACTGGAAGGTGGAGACCTCTTGGAGAAGGCGGCAGCAAACGTATCGATAGTGCGGGGCAGTTTGTCCGAAGCTAGGGCTAAG
tactgac putative branch site (score: 3)
taatctt TA-rich tract