1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...tagagttaagttttcttgagtcgggaagggatgtttctcagctgtttacggcttgatctggtaattatgaaagtcctcactcaagctcgccattgactagATTGACCGCTTGCTGGAACTTTACGCAAAATGGGAAAAGGACAAGCATGTGCGCATGGTTATTCTTACA
species | Physcomitrella patens |
transcript | PP1S83_160V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TCGCCATCTTGAATAGGCCGAAGAAACTCAATGCCCTTAATGAAAATATG ATTGACCGCTTGCTGGAACTTTACGCAAAATGGGAAAAGGACAAGCATGTGEST: gi|100445433|gb|CJ975582.1|CJ975582
genomic: TCGCCATCTTGAATAGGCCGAAGAAACTCAATGCCCTTAATGAAAATATGgtagagacaa ... cattgactagATTGACCGCTTGCTGGAACTTTACGCAAAATGGGAAAAGGACAAGCATGTG
EST: TCGCCATCTTGAATAGGCCGAAGAAACTCAATGCCCTTAATGAAAATATG ATTGACCGCTTGCTGGAACTTTACGCAAAATGGGAAAAGGACAAGCATGTG
genomic: TCGCCATCTTGAATAGGCCGAAGAAACTCAATGCCCTTAATGAAAATATGgtagagacaa ... cattgactagATTGACCGCTTGCTGGAACTTTACGCAAAATGGGAAAAGGACAAGCATGTG
ttacggcttgatctggtaattatgaaagtcctcactcaagctcgccattgactagATTGACCGCTTGCTGGAACTTTACGCAAAATGGGAAAAGGACAAGCATGTGCGCATGGTTATTCTTACA
tcctcac putative branch site (score: 4)
taattatgaaa TA-rich tract